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qs_3_scaffold_550

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_550_1
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(203..451)
DNA (249bp) protein (83aa)
UspA domain protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PIX7_9EURY
UspA domain protein {ECO:0000313|EMBL:EMA68715.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
UspA domain-containing protein
qs_3_scaffold_550_2
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(494..682)
DNA (189bp) protein (63aa)
UspA domain-containing protein {ECO:0000313|EMBL:ELY73621.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strai
qs_3_scaffold_550_3
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(902..2416)
DNA (1515bp) protein (505aa)
Phosphoesterase RecJ domain protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JT38_NATP1
single-stranded DNA-specific exonuclease
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:ELY70655.1}; Single-stranded DNA-specific exonuclease {ECO:0000313|EMBL:AGB33556.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; N
qs_3_scaffold_550_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2573..3397)
DNA (825bp) protein (275aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EMA36199.1}; EC=4.2.1.75 {ECO:0000313|EMBL:EMA36199.1};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Uroporphyrinogen-III synthase n=2 Tax=Halococcus hamelinensis RepID=M0LUZ4_9EURY
hemD; uroporphyrinogen-III synthase
qs_3_scaffold_550_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3394..4575)
DNA (1182bp) protein (394aa)
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9U1_9EURY
Porphobilinogen deaminase {ECO:0000313|EMBL:EMA42496.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
qs_3_scaffold_550_6
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4741..5136
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9Y1H6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY66733.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
qs_3_scaffold_550_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5143..5523
DNA (381bp) protein (127aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
hypothetical PIN domain protein id=24613662 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
hypothetical PIN domain protein
qs_3_scaffold_550_8
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6098..7225
DNA (1128bp) protein (376aa)
alanine--glyoxylate transaminase (EC:2.6.1.44)
Alanine--glyoxylate transaminase {ECO:0000313|EMBL:AEH36827.1}; EC=2.6.1.44 {ECO:0000313|EMBL:AEH36827.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Hal
Alanine--glyoxylate transaminase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D991_HALXS
qs_3_scaffold_550_9
unknown

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comp(7199..7288)
DNA (90bp) protein (30aa)

This feature has no annotations

qs_3_scaffold_550_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7350..8666
DNA (1317bp) protein (439aa)
Amidase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAR4_HALJB
Amidase
Amidase {ECO:0000313|EMBL:ADJ14786.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (strain DSM 18
qs_3_scaffold_550_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8752..9999)
DNA (1248bp) protein (416aa)
gdhA_2; glutamate dehydrogenase 2 (EC:1.4.1.3 1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKK2_9EURY
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
qs_3_scaffold_550_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10157..11065)
DNA (909bp) protein (303aa)
citryl-CoA lyase (EC:4.1.3.34)
Citrate lyase subunit beta n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M495_9EURY
Citrate lyase subunit beta {ECO:0000313|EMBL:EMA39200.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
qs_3_scaffold_550_13
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11230..11697
DNA (468bp) protein (156aa)
Acyl dehydratase MaoC n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XEB9_9EURY
Acyl dehydratase MaoC {ECO:0000313|EMBL:ELY60075.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 1
acyl dehydratase
qs_3_scaffold_550_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11716..11871)
DNA (156bp) protein (52aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IVY2_9EURY
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:ESP87307.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candi
Glyoxalase/bleomycin resistance protein/dioxygenase
Displaying 14 items

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