ggKbase home page

qs_3_scaffold_246

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_246_1
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..1601
DNA (1599bp) protein (533aa)
Stress response protein/ transporter 5 ( substrates cationic amino acids) n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G8S0_9EURY
Stress response protein/ transporter 5 (Substrates cationic amino acids) {ECO:0000313|EMBL:ELZ68590.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halo
amino acid transporter
qs_3_scaffold_246_2
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1798..2331
DNA (534bp) protein (178aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Natronococcus occultus SP4 RepID=L0JTV9_9EURY
acetyltransferase, ribosomal protein N-acetylase
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:AGB36191.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natron
qs_3_scaffold_246_3
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2517..2711)
DNA (195bp) protein (65aa)
Cold shock protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W0R0_9EURY
cold shock protein
Cold shock protein {ECO:0000313|EMBL:AGN02141.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
qs_3_scaffold_246_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2859..3692)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5A4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52309.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_3_scaffold_246_5
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3901..5328
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I216_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ90048.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-
qs_3_scaffold_246_6
unknown

Not on your lists

5628..5795
DNA (168bp) protein (56aa)

This feature has no annotations

qs_3_scaffold_246_7
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5919..6758
DNA (840bp) protein (280aa)
proline dehydrogenase (EC:1.5.99.8)
Proline dehydrogenase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LR25_9EURY
Proline dehydrogenase {ECO:0000313|EMBL:EMA40032.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 10
qs_3_scaffold_246_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6911..8377
DNA (1467bp) protein (489aa)
Transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDP0_9EURY
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
transporter
qs_3_scaffold_246_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8379..8723
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY70_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90536.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_3_scaffold_246_10
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8728..9906)
DNA (1179bp) protein (393aa)
FAD dependent oxidoreductase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DCJ1_HALXS
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEH36033.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain
qs_3_scaffold_246_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9990..11159
DNA (1170bp) protein (390aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
histidinol phosphate aminotransferase apoenzyme (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSU5_9EURY
qs_3_scaffold_246_12
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11187..11768
DNA (582bp) protein (194aa)
Putative adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00039}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00039};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00039};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-R
adenylate kinase (EC:2.7.4.3)
Putative adenylate kinase n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AT40_9EURY
qs_3_scaffold_246_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11911..12519
DNA (609bp) protein (203aa)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI00037E7F2F
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ACV48485.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
qs_3_scaffold_246_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12601..13158
DNA (558bp) protein (186aa)
XRE family transcriptional regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0M4_9EURY
XRE family transcriptional regulator {ECO:0000313|EMBL:EMA53313.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
hypothetical protein
qs_3_scaffold_246_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13258..13905
DNA (648bp) protein (216aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2A9_HALJB
qs_3_scaffold_246_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14074..15378
DNA (1305bp) protein (435aa)
acetamidase/formamidase (EC:3.5.1.-)
Acetamidase/formamidase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MT96_HALMO
Acetamidase/formamidase {ECO:0000313|EMBL:EMA47695.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
qs_3_scaffold_246_17
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15818..17125
DNA (1308bp) protein (436aa)
MFS transporter n=1 Tax=Halomicrobium katesii RepID=UPI00035C512E
Multidrug resistance protein-like protein {ECO:0000313|EMBL:EMA07662.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
MFS transporter
qs_3_scaffold_246_18
unknown

Not on your lists

comp(17399..17911)
DNA (513bp) protein (171aa)

This feature has no annotations

qs_3_scaffold_246_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18593..18820
DNA (228bp) protein (76aa)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMY4_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA47037.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
AMP-dependent synthetase and ligase
qs_3_scaffold_246_20
unknown

Not on your lists

comp(18885..19259)
DNA (375bp) protein (125aa)

This feature has no annotations

qs_3_scaffold_246_21
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19351..20247)
DNA (897bp) protein (299aa)
Carbonic anhydrase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DHR1_9EURY
Carbonic anhydrase {ECO:0000313|EMBL:ELZ35011.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14
carbonic anhydrase
qs_3_scaffold_246_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20379..21704)
DNA (1326bp) protein (442aa)
Acetylornithine transaminase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N904_9EURY
Acetylornithine transaminase {ECO:0000313|EMBL:EMA53574.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandens
class III aminotransferase
qs_3_scaffold_246_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21875..22573
DNA (699bp) protein (233aa)
Putative RNA methylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAH5_9EURY
Putative RNA methylase {ECO:0000313|EMBL:EMA53655.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
RNA methyltransferase
qs_3_scaffold_246_24
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22595..23209)
DNA (615bp) protein (205aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halogranum salarium B-1 RepID=J3EZ40_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EJN60757.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
putative oxidoreductase
qs_3_scaffold_246_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23773..24633
DNA (861bp) protein (287aa)
cytochrome c oxidase polypeptide III (EC:1.9.3.1)
Cytochrome c oxidase subunit III n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQF8_9EURY
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:EMA47553.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacchar
qs_3_scaffold_246_26
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24746..25642)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LX28_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38132.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
qs_3_scaffold_246_27
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25680..28013)
DNA (2334bp) protein (778aa)
Cytochrome-c oxidase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRW6_9EURY
Cytochrome-c oxidase {ECO:0000313|EMBL:EFW92735.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus
cytochrome C oxidase subunit I
qs_3_scaffold_246_28
unknown

Not on your lists

28268..28468
DNA (201bp) protein (67aa)

This feature has no annotations

qs_3_scaffold_246_29
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28552..28818)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JFZ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59684.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_3_scaffold_246_30
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28931..30760)
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZU6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51126.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
Rhomboid family protein
Displaying 30 items

View Taxonomy