ggKbase home page

qs_3_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 124 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_56_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..240
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYM2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50706.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_3_scaffold_56_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(206..355)
DNA (150bp) protein (50aa)
UPF0391 membrane protein ZOD2009_18764 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY63_9EURY
UPF0391 membrane protein ZOD2009_18764 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladap
hypothetical protein
qs_3_scaffold_56_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(640..1923)
DNA (1284bp) protein (428aa)
exoribonuclease II (EC:3.1.13.1)
Exoribonuclease II {ECO:0000313|EMBL:AEH36684.1}; EC=3.1.13.1 {ECO:0000313|EMBL:AEH36684.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" sour
Exoribonuclease II n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7V3_HALXS
qs_3_scaffold_56_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2003..2305)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVW2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49892.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_3_scaffold_56_5
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2392..2871
DNA (480bp) protein (160aa)
Hypotheical conserved protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YSE2_9EURY
Hypotheical conserved protein {ECO:0000313|EMBL:GAD51667.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.
conserved protein with predicted RNA binding PUA domain
qs_3_scaffold_56_6
unknown

Not on your lists

comp(3032..3373)
DNA (342bp) protein (114aa)

This feature has no annotations

qs_3_scaffold_56_7
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3696..5321
DNA (1626bp) protein (542aa)
Compatible solute transporter ( substrate choline/ glycine betaine) n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P7K7_9EURY
Compatible solute transporter (Substrate choline/ glycine betaine) {ECO:0000313|EMBL:EMA64825.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum
tp58; compatible solute transporter ( substrate choline/glycine betaine)
qs_3_scaffold_56_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5832..6962)
DNA (1131bp) protein (377aa)
Peptidase M29 aminopeptidase II n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML98_9EURY
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:EMA46148.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
ampS; leucyl aminopeptidase
qs_3_scaffold_56_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7163..7681)
DNA (519bp) protein (173aa)
amzA; archaemetzincin (EC:3.4.-.-)
Archaemetzincin {ECO:0000256|HAMAP-Rule:MF_01842}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_01842};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Archaemetzincin n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMY4_NATM8
qs_3_scaffold_56_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7769..8173
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2Q7_9EURY
UPF0146 protein C450_12600 {ECO:0000256|HAMAP-Rule:MF_00341}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
hypothetical protein
qs_3_scaffold_56_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8170..9054
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2D1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29595.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
HAD superfamily hydrolase
qs_3_scaffold_56_12
unknown

Not on your lists

9064..9249
DNA (186bp) protein (62aa)

This feature has no annotations

qs_3_scaffold_56_13
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9287..10009
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0AB89_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY94608.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989
hypothetical protein
qs_3_scaffold_56_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10226..10891
DNA (666bp) protein (222aa)
F420-dependent NADP reductase (EC:1.-.-.-)
NADPH-dependent F420 reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N0A2_9EURY
NADPH-dependent F420 reductase {ECO:0000313|EMBL:EMA50978.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
qs_3_scaffold_56_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11058..12590
DNA (1533bp) protein (511aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N888_9EURY
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000313|EMBL:EMA54066.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
alpha,alpha-trehalose-phosphate synthase (UDP-forming) rbh
qs_3_scaffold_56_16
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12853..13119)
DNA (267bp) protein (89aa)
Thioredoxin n=3 Tax=Haloarcula RepID=G0HQ76_HALHT
trxA2; thioredoxin
Thioredoxin {ECO:0000313|EMBL:AEM58186.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATCC 33960
qs_3_scaffold_56_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13321..13479
DNA (159bp) protein (53aa)
Preprotein translocase subunit SecG n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNC5_9EURY
Preprotein translocase subunit SecG {ECO:0000256|HAMAP-Rule:MF_00751}; Protein transport protein Sec61 subunit beta homolog {ECO:0000256|HAMAP-Rule:MF_00751}; TaxID=1227455 species="Archaea; Euryarcha
preprotein translocase subunit secG
qs_3_scaffold_56_18
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13561..14163
DNA (603bp) protein (201aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase g
Glutamine amidotransferase subunit PdxT n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A155_9EURY
SNO glutamine amidotransferase
qs_3_scaffold_56_19
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14244..14696
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W410_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00842.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qs_3_scaffold_56_20
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14693..15085
DNA (393bp) protein (131aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020};; TaxID=519442 species="Archaea; Eu
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNR4_HALUD
phosphoribosyl-ATP diphosphatase
qs_3_scaffold_56_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15167..15481)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTT1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92010.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_3_scaffold_56_22
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15598..15840)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B2R7_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELZ04857.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
qs_3_scaffold_56_23
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16058..16516)
DNA (459bp) protein (153aa)
5'-nucleotidase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DN20_9EURY
5'-nucleotidase {ECO:0000313|EMBL:ELZ35529.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
5'-nucleotidase
qs_3_scaffold_56_24
unknown

Not on your lists

comp(16607..16885)
DNA (279bp) protein (93aa)

This feature has no annotations

qs_3_scaffold_56_25
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17175..18131
DNA (957bp) protein (319aa)
GTP-binding protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7N0_HALJB
GTP-binding protein
GTP-binding protein {ECO:0000313|EMBL:ADJ16050.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (s
qs_3_scaffold_56_26
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18119..19540)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LVW3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37591.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_3_scaffold_56_27
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19804..20421
DNA (618bp) protein (206aa)
Probable GTP-binding protein EngB n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0N8_9EURY
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
GTP-binding protein
qs_3_scaffold_56_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20568..22400)
DNA (1833bp) protein (611aa)
ATPase RIL n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D670_9EURY
ATPase RIL {ECO:0000313|EMBL:ELZ30353.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ATPase RIL
qs_3_scaffold_56_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22400..22702)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM88_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46812.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_3_scaffold_56_30

Not on your lists

22945..23220
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MNB8_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07266.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Displaying items 1-30 of 124 in total

View Taxonomy