ggKbase home page

qs_4_scaffold_1247

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1247_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(142..828)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZU4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28143.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
conserved hypothetical membrane protein (DUF2270)
qs_4_scaffold_1247_2
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1156..1524
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WYX3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG02300.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qs_4_scaffold_1247_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1809..2030)
DNA (222bp) protein (74aa)
Putative cationic amino acid transport protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAH1_9EURY
cat1; cationic amino acid transport protein
Putative cationic amino acid transport protein {ECO:0000313|EMBL:ELZ32446.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Hal
qs_4_scaffold_1247_4
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2027..2416)
DNA (390bp) protein (130aa)
Putative cationic amino acid transport protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IMG2_9EURY
Putative cationic amino acid transport protein {ECO:0000313|EMBL:ELZ96659.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
cationic amino acid transport protein
qs_4_scaffold_1247_5
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2724..3107
DNA (384bp) protein (128aa)
ArsR family transcriptional regulator n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZL10_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:ELY86247.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensi
putative transcriptional regulator
qs_4_scaffold_1247_6
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3109..4068
DNA (960bp) protein (320aa)
Permease n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZM53_9EURY
Permease {ECO:0000313|EMBL:ELY86248.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
permease
qs_4_scaffold_1247_7
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4079..4828)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NN54_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA59008.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
qs_4_scaffold_1247_8
unknown

Not on your lists

4903..5163
DNA (261bp) protein (87aa)

This feature has no annotations

qs_4_scaffold_1247_9
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5038..6312)
DNA (1275bp) protein (425aa)
Transposase, IS605 OrfB family protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KLB4_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:EMA20959.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula ca
transposase, IS605 OrfB family
qs_4_scaffold_1247_10
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6498..7862
DNA (1365bp) protein (455aa)
Major facilitator superfamily transporter n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XME4_9EURY
Major facilitator superfamily transporter {ECO:0000313|EMBL:ELY61838.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcu
MFS transporter rbh
qs_4_scaffold_1247_11
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8006..8161
DNA (156bp) protein (52aa)
Uncharacterized protein n=4 Tax=Haloarcula RepID=Q5UYR7_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA25516.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
qs_4_scaffold_1247_12
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8565..9635)
DNA (1071bp) protein (357aa)
Alcohol dehydrogenase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C319_9EURY
Alcohol dehydrogenase {ECO:0000313|EMBL:ELZ17038.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563
alcohol dehydrogenase
qs_4_scaffold_1247_13
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9679..10671)
DNA (993bp) protein (331aa)
Transketolase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W1Z8_9EURY
Transketolase {ECO:0000313|EMBL:ELY43372.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens JCM 14089.;
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
qs_4_scaffold_1247_14
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10668..11678)
DNA (1011bp) protein (337aa)
Dehydrogenase E1 component n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A397_9EURY
Dehydrogenase E1 component {ECO:0000313|EMBL:ELY91823.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281
dehydrogenase E1 component
qs_4_scaffold_1247_15
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11821..13362
DNA (1542bp) protein (514aa)
FGGY family of carbohydrate kinase, C-terminal domain protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R614_9THEO
FGGY family of carbohydrate kinase, C-terminal domain protein {ECO:0000313|EMBL:EEB76650.1}; Glycerol kinase {ECO:0000313|EMBL:KKC30743.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Ther
carbohydrate kinase
qs_4_scaffold_1247_16

Not on your lists

13559..14836
DNA (1278bp) protein (426aa)
SAF domain protein n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RKW5_HALHG
Uncharacterized protein {ECO:0000313|EMBL:KKM07998.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SAF domain-containing protein
qs_4_scaffold_1247_17
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14846..15916)
DNA (1071bp) protein (357aa)
Alcohol dehydrogenase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0ALX5_9EURY
Alcohol dehydrogenase {ECO:0000313|EMBL:ELY98388.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
alcohol dehydrogenase zinc-binding domain protein
qs_4_scaffold_1247_18
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16093..16950)
DNA (858bp) protein (286aa)
ABC sugar transporter ATPase subunit protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGM4_9EURY
monosaccharide ABC-transport system ATP binding protein
ABC sugar transporter ATPase subunit protein {ECO:0000313|EMBL:ERJ05044.1}; Monosaccharide ABC-transport system ATP binding protein {ECO:0000313|EMBL:CCQ33088.1}; TaxID=1033806 species="Archaea; Eurya
qs_4_scaffold_1247_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16991..18709)
DNA (1719bp) protein (573aa)
ABC transporter integral membrane protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D7Z6_9EURY
ABC transporter integral membrane protein {ECO:0000313|EMBL:ELZ30279.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimpl
ABC transporter integral membrane protein
qs_4_scaffold_1247_20
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18796..19875)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DCE2_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH38402.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
qs_4_scaffold_1247_21
unknown

Not on your lists

20264..20326
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 21 items

View Taxonomy