ggKbase home page

qs_4_scaffold_125

Search features with annotation key words

Displaying items 1-30 of 82 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_125_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..220)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SSP6_9EURY
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:ERH10441.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_4_scaffold_125_2
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

374..1555
DNA (1182bp) protein (394aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ELY50458.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ELY50458.1};; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrono
Acetyl-CoA acetyltransferase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WQ41_9EURY
acetyl-CoA acetyltransferase
qs_4_scaffold_125_3
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1552..1965
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLS8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50419.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qs_4_scaffold_125_4

Not on your lists

2165..3724
DNA (1560bp) protein (520aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y2I4_9ARCH
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:ESS05137.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
AMP-dependent synthetase and ligase
qs_4_scaffold_125_5
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3778..4575)
DNA (798bp) protein (266aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TID7_9GAMM
Enoyl-CoA hydratase/carnithine racemase
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:AGS40652.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" sourc
qs_4_scaffold_125_6
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4757..6226
DNA (1470bp) protein (490aa)
Glutamyl-tRNA amidotransferase subunit A n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8K0_9EURY
glutamyl-tRNA amidotransferase subunit A
Glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:AGN01868.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum
qs_4_scaffold_125_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6228..6608)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZW3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27957.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_4_scaffold_125_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(6678..7676)
DNA (999bp) protein (333aa)
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11) id=14425085 bin=bin1_lowGC species=Halopiger xanaduensis genus=Halopiger taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11) Tax=CSP1_2_Dadabacteria
coenzyme F420-dependent oxidoreductase, NP1902A family
qs_4_scaffold_125_9
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(7770..9185)
DNA (1416bp) protein (472aa)
MmgE/PrpD family protein n=1 Tax=Lentibacillus jeotgali RepID=UPI00026283FC
MmgE/PrpD family protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
MmgE/PrpD family protein
qs_4_scaffold_125_10
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9267..10412)
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZU8_HALTV
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADB62645.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena tur
qs_4_scaffold_125_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10465..11355)
DNA (891bp) protein (297aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGB9_ARCPA
qs_4_scaffold_125_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11418..13142)
DNA (1725bp) protein (575aa)
hyuB; N-methylhydantoinase (ATP-hydrolyzing) B (EC:3.5.2.14); K01474 N-methylhydantoinase B [EC:3.5.2.14] id=24634356 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
hyuB; N-methylhydantoinase (ATP-hydrolyzing) B (EC:3.5.2.14)
Uncharacterized protein {ECO:0000313|EMBL:ETX02888.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
qs_4_scaffold_125_13
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13139..15190)
DNA (2052bp) protein (684aa)
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Halobacterium sp. DL1 RepID=G4II81_9EURY
Hydantoinase {ECO:0000313|EMBL:AHG03071.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
qs_4_scaffold_125_14

Not on your lists

comp(15278..16840)
DNA (1563bp) protein (521aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y2I4_9ARCH
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:ESS05137.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
long-chain-fatty-acid--CoA ligase
qs_4_scaffold_125_15
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16850..17260)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VLC4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY37772.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
qs_4_scaffold_125_16
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17467..17949
DNA (483bp) protein (161aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ELY46700.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ELY46700.1};; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natri
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WB24_9EURY
short-chain dehydrogenase/reductase SDR
qs_4_scaffold_125_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17796..18113)
DNA (318bp) protein (106aa)
oadhA3; 2-oxoacid dehydrogenase E1 component subunit alpha (EC:1.2.4.-)
2-oxoacid dehydrogenase E1 component alpha subunit n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVV4_9EURY
2-oxoacid dehydrogenase E1 component alpha subunit {ECO:0000313|EMBL:EFW91367.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source=
qs_4_scaffold_125_18
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18258..19457)
DNA (1200bp) protein (400aa)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLS1_9EURY
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ELY50425.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius
3-hydroxybutyryl-CoA dehydrogenase
qs_4_scaffold_125_19
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19509..20612)
DNA (1104bp) protein (368aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Halogranum salarium B-1 RepID=J2ZBL7_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EJN58060.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salar
livM5; branched-chain amino acid ABC transporter permease
qs_4_scaffold_125_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20609..21598)
DNA (990bp) protein (330aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N805_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA53254.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
livH5; branched-chain amino acid ABC transporter permease
qs_4_scaffold_125_21
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21608..22357)
DNA (750bp) protein (250aa)
ABC transporter n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XNH2_9EURY
ABC transporter {ECO:0000313|EMBL:ELY62946.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
abc06a1; branched chain amino acid ABC transporter ATP-binding protein
qs_4_scaffold_125_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22354..23091)
DNA (738bp) protein (246aa)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain/neutral amino acids) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ILZ1_NATPD
abc06a2; branched chain amino acid ABC transporter ATP-binding protein
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAI50878.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
qs_4_scaffold_125_23
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23269..24729
DNA (1461bp) protein (487aa)
Amidase n=1 Tax=Halobacterium sp. DL1 RepID=G4IHC6_9EURY
Amidase {ECO:0000313|EMBL:AHG04369.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
amidase
qs_4_scaffold_125_24
unknown

Not on your lists

24894..25130
DNA (237bp) protein (79aa)

This feature has no annotations

qs_4_scaffold_125_25
unknown

Not on your lists

comp(25207..25623)
DNA (417bp) protein (139aa)

This feature has no annotations

qs_4_scaffold_125_26
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25827..26642
DNA (816bp) protein (272aa)
ech4; enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KCG3_HALAR
Enoyl-CoA hydratase {ECO:0000313|EMBL:EMA17879.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12
qs_4_scaffold_125_27
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26941..28434)
DNA (1494bp) protein (498aa)
Amidase clustered with urea ABC transporter and nitrile hydratase functions n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A2F5_9EURY
Amidase clustered with urea ABC transporter and nitrile hydratase functions {ECO:0000313|EMBL:GAD51814.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
qs_4_scaffold_125_28
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28513..29331)
DNA (819bp) protein (273aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9USH2_HALBP
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ELY27651.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeo
sigma-70 family RNA polymerase sigma factor
qs_4_scaffold_125_29
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29820..30584)
DNA (765bp) protein (255aa)
Transcriptional regulator, IclR family n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LMU4_HALLT
transcriptional regulator, IclR family
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACM56682.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusp
qs_4_scaffold_125_30
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30657..32024)
DNA (1368bp) protein (456aa)
MmgE/PrpD family protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NJV0_9EURY
MmgE/PrpD family protein {ECO:0000313|EMBL:EMA58262.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 219
MmgE/PrpD family protein rbh
Displaying items 1-30 of 82 in total

View Taxonomy