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qs_4_scaffold_1355

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1355_1
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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155..1276
DNA (1122bp) protein (374aa)
spermidine/putrescine ABC transporter ATPase (EC:3.6.3.31)
Spermidine/putrescine ABC transporter ATPase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HYT9_9EURY
Spermidine/putrescine ABC transporter ATPase {ECO:0000313|EMBL:ELZ89765.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax su
qs_4_scaffold_1355_2
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1322..3700)
DNA (2379bp) protein (793aa)
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein Tax=RBG_16_Deltaproteobacteria_49_23_curated
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=2282551 bin=GWB2_Chloroflexi_54_36 species=unknown genus=Desulfurococcus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
aldehyde oxidase and xanthine dehydrogenase, large chain
qs_4_scaffold_1355_3
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3700..4197)
DNA (498bp) protein (166aa)
[2Fe-2S] binding domain-containing protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W354_9EURY
[2Fe-2S] binding domain-containing protein {ECO:0000313|EMBL:ELY43202.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubr
(2Fe-2S)-binding domain-containing protein
qs_4_scaffold_1355_4
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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comp(4194..5060)
DNA (867bp) protein (289aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
carbon monoxide dehydrogenase (EC:1.2.99.2)
Carbon monoxide dehydrogenase medium chain n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1E9_THERP
qs_4_scaffold_1355_5
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5220..6182
DNA (963bp) protein (321aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I2Z9_9EURY
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:ELZ89774.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;"
potB; spermidine/putrescine ABC transporter permease protein PotB
qs_4_scaffold_1355_6
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6175..7005
DNA (831bp) protein (277aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JDL2_9EURY
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EMA05780.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;"
ABC-type spermidine/putrescine transport system, permease component II
qs_4_scaffold_1355_7

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comp(7084..9411)
DNA (2328bp) protein (776aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Uncharacterized protein {ECO:0000313|EMBL:KKN50080.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Xanthine dehydrogenase, molybdenum binding subunit apoprotein id=2282555 bin=GWB2_Chloroflexi_54_36 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
qs_4_scaffold_1355_8
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9559..10413)
DNA (855bp) protein (285aa)
ArcR family transcription regulator n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JGF6_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:EMA08207.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrifica
arcR5; ArcR family transcription regulator
qs_4_scaffold_1355_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10815..11342
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MQ26_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47822.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_1355_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11634..12227
DNA (594bp) protein (198aa)
Transposase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMT6_9EURY
Transposase {ECO:0000313|EMBL:EMA46034.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
integrase catalytic subunit
qs_4_scaffold_1355_11
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12484..12840)
DNA (357bp) protein (119aa)
Dihydropyrimidinase {ECO:0000313|EMBL:KHK54730.1}; EC=3.5.2.2 {ECO:0000313|EMBL:KHK54730.1};; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ra
phenylhydantoinase (EC:3.5.2.2)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI00035DE652
qs_4_scaffold_1355_12
unknown

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13152..13676
DNA (525bp) protein (175aa)

This feature has no annotations

qs_4_scaffold_1355_13
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(13924..14454)
DNA (531bp) protein (177aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
Orotate phosphoribosyltransferase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T1S6_NATMM
orotate phosphoribosyltransferase
qs_4_scaffold_1355_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14713..14808)
DNA (96bp) protein (32aa)
Transposase IS4 family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTP7_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:EMA48124.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
Displaying 14 items

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