ggKbase home page

qs_4_scaffold_142

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_142_1

Not on your lists

651..1574
DNA (924bp) protein (308aa)
Phosphoglycerate dehydrogenase related dehydrogenase n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y4G4_9ARCH
Phosphoglycerate dehydrogenase related dehydrogenase {ECO:0000313|EMBL:ESS09658.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
qs_4_scaffold_142_2
unknown

Not on your lists

1659..1769
DNA (111bp) protein (37aa)

This feature has no annotations

qs_4_scaffold_142_3

Not on your lists

comp(1780..3342)
DNA (1563bp) protein (521aa)
N-acyl-D-glutamate deacylase (EC:3.5.1.82)
N-acyl-D-aspartate/D-glutamate deacylase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XRD8_9ARCH
N-acyl-D-aspartate/D-glutamate deacylase {ECO:0000313|EMBL:ESS02611.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
qs_4_scaffold_142_4
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3476..4846)
DNA (1371bp) protein (457aa)
Dihydroorotase-like cyclic amidohydrolase n=1 Tax=Natronococcus occultus SP4 RepID=L0K2X1_9EURY
dihydroorotase-like cyclic amidohydrolase
Dihydroorotase-like cyclic amidohydrolase {ECO:0000313|EMBL:AGB38890.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus
qs_4_scaffold_142_5
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4903..6210)
DNA (1308bp) protein (436aa)
N-carbamoyl-L-amino acid amidohydrolase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XY69_9EURY
N-carbamoyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:ELY65513.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versifor
amaB2; N-carbamoyl-L-amino acid amidohydrolase
qs_4_scaffold_142_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6313..6858)
DNA (546bp) protein (182aa)
apt2; purine phosphoribosyltransferase (adenine phosphoribosyltransferase, xanthine-guanine phosphoribosyltransferase) (EC:2.4.2.-)
HGPRTase-like protein 2 {ECO:0000255|HAMAP-Rule:MF_01467}; EC=2.4.2.- {ECO:0000255|HAMAP-Rule:MF_01467};; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Hal
HGPRTase-like protein 2 n=2 Tax=Haloquadratum walsbyi RepID=HPRL2_HALWC
qs_4_scaffold_142_7
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7055..7777)
DNA (723bp) protein (241aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein id=24634386 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERG97182.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
ABC transporter
qs_4_scaffold_142_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7783..8550)
DNA (768bp) protein (256aa)
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein id=24634385 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERG97181.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
ABC transporter ATP-binding protein
qs_4_scaffold_142_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8540..9601)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TV99_9EURY
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ERG97180.1}; Flags: Fragment;; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
inner-membrane translocator
qs_4_scaffold_142_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9598..10434)
DNA (837bp) protein (279aa)
braD; branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein id=24634383 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERG97177.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloq
braD; branched chain amino acid ABC transporter
qs_4_scaffold_142_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10479..11783)
DNA (1305bp) protein (435aa)
Uncharacterized protein (Fragment) n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PXI6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG97176.1}; Flags: Fragment;; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadra
Extracellular ligand-binding receptor
qs_4_scaffold_142_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12151..13431
DNA (1281bp) protein (427aa)
amidohydrolase; K01485 cytosine deaminase [EC:3.5.4.1] id=24634379 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Cytosine deaminase related metal-dependent hydrolase {ECO:0000313|EMBL:ERG97172.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source=
hypothetical protein
qs_4_scaffold_142_13
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13516..14301
DNA (786bp) protein (262aa)
ArcR family transcription regulator n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XNG8_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:ELY63295.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme J
transcriptional regulator, IclR family
qs_4_scaffold_142_14
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14690..15073
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEP1_9EURY
Endoribonuclease L-PSP {ECO:0000313|EMBL:ELZ32619.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JC
endoribonuclease L-PSP
qs_4_scaffold_142_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15277..15999)
DNA (723bp) protein (241aa)
fumarylacetoacetate hydrolase (EC:5.3.3.10)
Fumarylacetoacetate hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMP9_9EURY
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:ELZ23682.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
qs_4_scaffold_142_16
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16263..17597)
DNA (1335bp) protein (445aa)
guaD1; probable nucleoside deaminase (cytosine/guanine deaminase) (EC:3.5.4.-)
Cytosine deaminase related metal-dependent hydrolase n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NIU4_9EURY
Cytosine deaminase related metal-dependent hydrolase {ECO:0000313|EMBL:ERG97155.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source=
qs_4_scaffold_142_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17684..18286)
DNA (603bp) protein (201aa)
UDP-N-acetylglucosamine pyrophosphorylase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D920_9EURY
UDP-N-acetylglucosamine pyrophosphorylase {ECO:0000313|EMBL:ELZ31323.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
UDP-N-acetylglucosamine pyrophosphorylase
qs_4_scaffold_142_18
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18303..18653)
DNA (351bp) protein (117aa)
Transthyretin-like protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0B5H8_9EURY
Transthyretin-like protein {ECO:0000313|EMBL:ELZ04914.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10
transthyretin-like protein
qs_4_scaffold_142_19
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18650..19618)
DNA (969bp) protein (323aa)
pucL1; uricase (EC:1.7.3.3); K00365 urate oxidase [EC:1.7.3.3] id=24634366 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Uricase {ECO:0000256|PIRNR:PIRNR000241}; EC=1.7.3.3 {ECO:0000256|PIRNR:PIRNR000241};; Urate oxidase {ECO:0000256|PIRNR:PIRNR000241}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Halofe
pucL1; uricase (EC:1.7.3.3)
qs_4_scaffold_142_20
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19845..20354)
DNA (510bp) protein (170aa)
Uricase n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0B2Y6_9EURY
Uricase {ECO:0000313|EMBL:ELZ04917.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990.;"
Uricase
qs_4_scaffold_142_21
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20565..21977
DNA (1413bp) protein (471aa)
uraA4; xanthine/uracil permease family transport protein; K03458 nucleobase:cation symporter-2, NCS2 family id=24629112 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Xanthine permease {ECO:0000313|EMBL:ERG91862.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW1.;"
uraA4; xanthine/uracil permease family transport protein
qs_4_scaffold_142_22
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22010..22885)
DNA (876bp) protein (292aa)
coxM2; aerobic-type carbon monoxide dehydrogenase medium subunit (EC:1.2.99.2)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PTN0_9EURY
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein {ECO:0000313|EMBL:ERG97162.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
qs_4_scaffold_142_23
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22886..25261)
DNA (2376bp) protein (792aa)
coxL2; aerobic-type carbon monoxide dehydrogenase large subunit (EC:1.2.99.2) id=24629114 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
coxL2; aerobic-type carbon monoxide dehydrogenase large subunit (EC:1.2.99.2)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein {ECO:0000313|EMBL:ERG91864.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacace
qs_4_scaffold_142_24
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25264..25746)
DNA (483bp) protein (161aa)
coxS2; aerobic-type carbon monoxide dehydrogenase small subunit (EC:1.2.99.2); K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] id=24634371 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
coxS2; aerobic-type carbon monoxide dehydrogenase small subunit (EC:1.2.99.2)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein {ECO:0000313|EMBL:ERG97164.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacace
qs_4_scaffold_142_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25983..27104)
DNA (1122bp) protein (374aa)
XdhC family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0C9Q2_9EURY
XdhC family protein {ECO:0000313|EMBL:ELZ19965.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
xdhC; xanthine and Co dehydrogenase maturation factor
qs_4_scaffold_142_26
unknown

Not on your lists

comp(27857..28114)
DNA (258bp) protein (86aa)

This feature has no annotations

qs_4_scaffold_142_27
unknown

Not on your lists

comp(28121..28636)
DNA (516bp) protein (172aa)

This feature has no annotations

qs_4_scaffold_142_28
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28639..29178)
DNA (540bp) protein (180aa)
small terminal subunit of phenylpropionate dioxygenase (EC:1.14.12.19)
Phenylpropionate dioxygenase {ECO:0000313|EMBL:AHZ24162.1}; Small terminal subunit of phenylpropionate dioxygenase {ECO:0000313|EMBL:AFK20974.1}; EC=1.14.12.19 {ECO:0000313|EMBL:AFK20974.1};; TaxID=52
Small terminal subunit of phenylpropionate dioxygenase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9R4_HALMT
qs_4_scaffold_142_29
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29175..30548)
DNA (1374bp) protein (458aa)
putative dioxygenase alpha subunit YeaW / large terminal subunit of phenylpropionate dioxygenase (EC:1.14.12.19)
Putative dioxygenase alpha subunit YeaW / large terminal subunit of phenylpropionate dioxygenase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WNT2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE57053.1}; Flags: Fragment;; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnic
qs_4_scaffold_142_30
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30652..31032)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=1 Tax=Haloferax sp. BAB2207 RepID=L5NW41_9EURY
Endoribonuclease L-PSP {ECO:0000313|EMBL:ELK55074.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. BAB2207.;"
endoribonuclease L-PSP
Displaying items 1-30 of 51 in total

View Taxonomy