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qs_4_scaffold_1420

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1420_1
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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244..702
DNA (459bp) protein (153aa)
6-pyruvoyl tetrahydropterin synthase n=2 Tax=Halobacteriaceae RepID=B9LV86_HALLT
6-pyruvoyl tetrahydropterin synthase
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000313|EMBL:AHG05464.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halob
qs_4_scaffold_1420_2
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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705..1481
DNA (777bp) protein (259aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Archaeosine biosynthesis pro
7-carboxy-7-deazaguanine synthase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EPI0_9EURY
Radical SAM domain protein
qs_4_scaffold_1420_3
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1484..2116
DNA (633bp) protein (211aa)
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase I n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CCL4_9EURY
GTP cyclohydrolase I {ECO:0000313|EMBL:ELZ20996.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
qs_4_scaffold_1420_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2113..2811
DNA (699bp) protein (233aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Archaeosine biosyn
7-cyano-7-deazaguanine synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSL1_9EURY
queuosine biosynthesis protein QueC
qs_4_scaffold_1420_5
unknown

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3236..3778
DNA (543bp) protein (181aa)

This feature has no annotations

qs_4_scaffold_1420_6
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3882..4058)
DNA (177bp) protein (59aa)
CopG family transcriptional regulator n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AI27_NATGS
transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
CopG family transcriptional regulator {ECO:0000313|EMBL:ELY69007.1}; Putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain {ECO:0000313|EMBL:AFZ72700.1}; TaxID=797304 spe
qs_4_scaffold_1420_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4331..4621
DNA (291bp) protein (97aa)
Exonuclease VII, large subunit n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J336_HALVA
Exonuclease VII, large subunit
Exonuclease VII, large subunit {ECO:0000313|EMBL:EMA03517.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismort
qs_4_scaffold_1420_8
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4652..5098
DNA (447bp) protein (149aa)
Exonuclease VII, large subunit n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0P5T5_9EURY
Exonuclease VII, large subunit {ECO:0000313|EMBL:EMA65431.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM
Exonuclease VII, large subunit
qs_4_scaffold_1420_9
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5202..5387
DNA (186bp) protein (62aa)
exoVIIA; exonuclease VII small subunit (EC:3.1.11.6)
Exonuclease VII small subunit {ECO:0000313|EMBL:AAV44645.1}; EC=3.1.11.6 {ECO:0000313|EMBL:AAV44645.1};; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Exonuclease VII small subunit n=2 Tax=Haloarcula RepID=Q5V754_HALMA
qs_4_scaffold_1420_10
unknown

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comp(5325..5447)
DNA (123bp) protein (41aa)

This feature has no annotations

qs_4_scaffold_1420_11
unknown

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comp(5627..5800)
DNA (174bp) protein (58aa)

This feature has no annotations

qs_4_scaffold_1420_12
unknown

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comp(5819..6019)
DNA (201bp) protein (67aa)

This feature has no annotations

qs_4_scaffold_1420_13
unknown

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comp(6022..6627)
DNA (606bp) protein (202aa)

This feature has no annotations

qs_4_scaffold_1420_14
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6646..8520
DNA (1875bp) protein (625aa)
tRNA-guanine transglycosylase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W940_9EURY
tRNA-guanine transglycosylase
tRNA-guanine transglycosylase {ECO:0000313|EMBL:AGN01169.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht
qs_4_scaffold_1420_15
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8574..9038
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NJS1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA58071.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
qs_4_scaffold_1420_16
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9039..10298
DNA (1260bp) protein (420aa)
Queuine/other tRNA-ribosyltransferase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NJD8_9EURY
Queuine/other tRNA-ribosyltransferase {ECO:0000313|EMBL:EMA58072.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipoly
tRNA-guanine transglycosylase
qs_4_scaffold_1420_17
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10300..10413
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PBE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66145.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
Displaying 17 items

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