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qs_4_scaffold_1611

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1611_1
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..814
DNA (813bp) protein (271aa)
Endonuclease IV {ECO:0000313|EMBL:AKH96818.1}; EC=3.1.21.2 {ECO:0000313|EMBL:AKH96818.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarch
xthA; endonuclease IV/deoxyribonuclease IV (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RA80_HALMT
qs_4_scaffold_1611_2
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(826..2148)
DNA (1323bp) protein (441aa)
Transposase, IS605 OrfB family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPH0_HALUD
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ACV12725.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensi
qs_4_scaffold_1611_3
unknown

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comp(2334..2663)
DNA (330bp) protein (110aa)

This feature has no annotations

qs_4_scaffold_1611_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3221..4720
DNA (1500bp) protein (500aa)
ORC1-type DNA replication protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D6T5_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
cell division control protein 6-like protein
qs_4_scaffold_1611_5

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5639..6538
DNA (900bp) protein (300aa)
ugd; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=uncultured bacterium RepID=K2FQI9_9BACT
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EKE19989.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
qs_4_scaffold_1611_6
R_OP11_Roizmanbacteria_35_13, Roizmannbacteria, Microgenomates, Bacteria

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6540..7832
DNA (1293bp) protein (431aa)
family 2 glycosyl transferase Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_35_13_curated
family 2 glycosyl transferase id=5095173 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
family 2 glycosyl transferase
qs_4_scaffold_1611_7
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7914..8303
DNA (390bp) protein (130aa)
ORC1-type DNA replication protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PRL2_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis
cell division control protein 6-like protein
qs_4_scaffold_1611_8
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8381..8686
DNA (306bp) protein (102aa)
Orc1/cdc6 family replication initiation protein {ECO:0000313|EMBL:ERH11799.1}; Flags: Fragment;; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic arch
hypothetical protein id=24652130 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
qs_4_scaffold_1611_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9249..11351)
DNA (2103bp) protein (701aa)
DNA polymerase I {ECO:0000313|EMBL:EFW94229.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFW94229.1};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QMP5_9EURY
qs_4_scaffold_1611_10
unknown

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comp(11351..11485)
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 10 items

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