ggKbase home page

qs_4_scaffold_1661

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1661_1
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..288)
DNA (288bp) protein (96aa)
Probable urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577};; Imidazolonepropionate hydrolase {ECO
hutU; urocanate hydratase (EC:4.2.1.49)
Probable urocanate hydratase n=1 Tax=Halobacterium sp. DL1 RepID=G4IFV8_9EURY
qs_4_scaffold_1661_2
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

546..2039
DNA (1494bp) protein (498aa)
histidine ammonia-lyase (EC:4.3.1.3)
Probable histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229};; TaxID=547559 species="Archaea; Eu
Probable histidine ammonia-lyase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T1B9_NATMM
qs_4_scaffold_1661_3
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2110..2313)
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH37723.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas comm
qs_4_scaffold_1661_4
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2398..2799)
DNA (402bp) protein (134aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JD55_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EMA06911.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax
binding-protein-dependent transport systems inner membrane component
qs_4_scaffold_1661_5
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2796..3767)
DNA (972bp) protein (324aa)
ABC transporter n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XRM2_9EURY
ABC transporter {ECO:0000313|EMBL:ELY63283.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
ABC transporter
qs_4_scaffold_1661_6
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3764..4426)
DNA (663bp) protein (221aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GHG0_9BACT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCH53335.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;
binding-protein-dependent transport system inner membrane protein
qs_4_scaffold_1661_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4428..5369)
DNA (942bp) protein (314aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZL1_9EURY
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:EFW90132.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hala
yehZ; putative transporter subunit: periplasmic-binding component of ABC superfamily
qs_4_scaffold_1661_8
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5455..6105
DNA (651bp) protein (217aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IFW0_9EURY
Transcriptional regulator {ECO:0000313|EMBL:AHG03517.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;
HTH DNA-binding protein
qs_4_scaffold_1661_9
unknown

Not on your lists

comp(6096..6707)
DNA (612bp) protein (204aa)

This feature has no annotations

qs_4_scaffold_1661_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6857..7744
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IIG4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03001.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qs_4_scaffold_1661_11
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7818..9053
DNA (1236bp) protein (412aa)
urocanate hydratase (EC:4.2.1.49)
Probable urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577};; Imidazolonepropionate hydrolase {ECO
Probable urocanate hydratase n=1 Tax=Natronococcus occultus SP4 RepID=L0K343_9EURY
Displaying 11 items

View Taxonomy