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qs_4_scaffold_1790

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1790_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2..292)
DNA (291bp) protein (97aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeome
Endonuclease NucS n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9UIY2_HALBP
nuclease of the recb family
qs_4_scaffold_1790_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(563..715)
DNA (153bp) protein (51aa)
UPF0395 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN72_NATM8
UPF0395 family protein
UPF0395 family protein {ECO:0000313|EMBL:CCQ35352.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
qs_4_scaffold_1790_3
unknown

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comp(1115..1228)
DNA (114bp) protein (38aa)

This feature has no annotations

qs_4_scaffold_1790_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1741..3057)
DNA (1317bp) protein (439aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LX19_9EURY
histidinol dehydrogenase
qs_4_scaffold_1790_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3244..3993)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SN66_9EURY
abc06a1; branched chain amino acid ABC transporter ATP-binding protein
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAI50879.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
qs_4_scaffold_1790_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3990..4730)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TYI8_9EURY
abc06a2; branched chain amino acid ABC transporter ATP-binding protein
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAI50878.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
qs_4_scaffold_1790_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4727..5761)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U4W2_9EURY
abc06p2; branched-chain/neutral amino acids ABC transporter permease
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAI50877.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
qs_4_scaffold_1790_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5758..6651)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SVN3_9EURY
abc06p1; branched-chain/neutral amino acids ABC transporter permease
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAI50876.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
qs_4_scaffold_1790_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6676..7989)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SUZ2_9EURY
abc06s; branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein 2
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAI50875.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteri
qs_4_scaffold_1790_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8498..8941
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBL9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54963.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_4_scaffold_1790_11
unknown

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comp(9034..9309)
DNA (276bp) protein (92aa)

This feature has no annotations

qs_4_scaffold_1790_12
unknown

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comp(9309..9530)
DNA (222bp) protein (74aa)

This feature has no annotations

qs_4_scaffold_1790_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9530..9865)
DNA (336bp) protein (112aa)
SWIM zinc finger domain protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6W1_9EURY
SWIM zinc finger domain protein {ECO:0000313|EMBL:EMA41451.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
hypothetical protein
Displaying 13 items

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