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qs_4_scaffold_2085

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_2085_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..1452)
DNA (1452bp) protein (484aa)
YjeF-like protein, hydroxyethylthiazole kinase-related n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NNB4_HALBP
yjef-like protein, hydroxyethylthiazole kinase-related
YjeF-like protein, hydroxyethylthiazole kinase-related {ECO:0000313|EMBL:ADQ67452.1}; Yjef-like protein {ECO:0000313|EMBL:ELY23273.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Halof
qs_4_scaffold_2085_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1631..4876)
DNA (3246bp) protein (1082aa)
TPR repeat domain containing protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJE6_9EURY
tetratricopeptide repeat-containing hypothetical protein
TPR repeat domain containing protein {ECO:0000313|EMBL:ERJ05767.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ34298.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
qs_4_scaffold_2085_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4967..6583)
DNA (1617bp) protein (539aa)
PAS domain S-box n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQ92_HALBP
pas domain s-box
PAS domain S-box {ECO:0000313|EMBL:ADQ66654.1}; Pas domain s-box {ECO:0000313|EMBL:ELY30761.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometric
qs_4_scaffold_2085_4
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6744..7028)
DNA (285bp) protein (95aa)
Acylphosphatase {ECO:0000313|EMBL:EMA33096.1}; EC=3.6.1.7 {ECO:0000313|EMBL:EMA33096.1};; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source
acylphosphatase (EC:3.6.1.7)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0STC4_9EURY
qs_4_scaffold_2085_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7409..8119)
DNA (711bp) protein (237aa)
ogg; DNA N-glycosylase (EC:3.2.2.-)
DNA N-glycosylase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYG9_9EURY
DNA N-glycosylase {ECO:0000313|EMBL:EFW90235.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX2
qs_4_scaffold_2085_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8529..8963
DNA (435bp) protein (145aa)
UPF0212 protein HLRTI_003477 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2DXN0_9EURY
UPF0212 protein HLRTI_003477 {ECO:0000256|HAMAP-Rule:MF_01223}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiama
hypothetical protein
qs_4_scaffold_2085_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9070..9309)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IDP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03858.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qs_4_scaffold_2085_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9518..9925
DNA (408bp) protein (136aa)
Translation initiation factor 2 subunit beta n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPD9_9EURY
translation initiation factor IF-2 subunit beta
Translation initiation factor 2 subunit beta {ECO:0000256|HAMAP-Rule:MF_00232}; aIF2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; eIF-2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; TaxID=1033806 species="Archae
qs_4_scaffold_2085_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10003..10197)
DNA (195bp) protein (65aa)
Cold shock protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPX7_9EURY
Cold shock protein {ECO:0000313|EMBL:EFW93041.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX
cold-shock protein
qs_4_scaffold_2085_10

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comp(10355..11059)
DNA (705bp) protein (235aa)
Transcription initiation factor IIB n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TS77_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archa
tfb1; transcription initiation factor TFB
Displaying 10 items

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