ggKbase home page

qs_4_scaffold_2110

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_2110_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

253..2571
DNA (2319bp) protein (773aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NA15_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54716.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_4_scaffold_2110_2
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2655..3689
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V3A5_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV45997.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qs_4_scaffold_2110_3
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3808..3948
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5N4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15730.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_4_scaffold_2110_4
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3954..5243
DNA (1290bp) protein (430aa)
Glycosyl transferase family 2 n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XPK2_9EURY
glycosyl transferase family protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ELY63457.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 104
qs_4_scaffold_2110_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5818..6123
DNA (306bp) protein (102aa)
transposase IS200-family protein id=24630500 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Transposase {ECO:0000313|EMBL:ERG92790.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW1.;"
IS200-type transposase (TCE31)
qs_4_scaffold_2110_6
unknown

Not on your lists

comp(6198..6707)
DNA (510bp) protein (170aa)

This feature has no annotations

qs_4_scaffold_2110_7

Not on your lists

6921..7145
DNA (225bp) protein (75aa)
Transposase n=1 Tax=halophilic archaeon DL31 RepID=G2MQ41_9ARCH
transposase
Transposase {ECO:0000313|EMBL:AEN07810.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_4_scaffold_2110_8
unknown

Not on your lists

7158..7691
DNA (534bp) protein (178aa)

This feature has no annotations

qs_4_scaffold_2110_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7753..8280
DNA (528bp) protein (176aa)
nudF; ADP-ribose pyrophosphatase (EC:3.6.1.13) id=24627317 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
nudF; ADP-ribose pyrophosphatase (EC:3.6.1.13)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:ERG90034.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07
qs_4_scaffold_2110_10
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8270..9559)
DNA (1290bp) protein (430aa)
Glycosyltransferase family protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EIS2_9EURY
Glycosyltransferase family protein {ECO:0000313|EMBL:ELZ46958.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense
rfaG; glycosyltransferase family protein
qs_4_scaffold_2110_11
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9643..10704
DNA (1062bp) protein (354aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AKH97429.1}; EC=4.2.1.46 {ECO:0000313|EMBL:AKH97429.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
rfbB1; dTDP-glucose 4-6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4-6-dehydratase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V3C7_HALMA
qs_4_scaffold_2110_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10701..11660
DNA (960bp) protein (320aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxI
GDP-L-fucose synthase n=1 Tax=Halorubrum sp. T3 RepID=UPI0003605C36
galE8; UDP-glucose 4-epimerase
qs_4_scaffold_2110_13
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11667..12152
DNA (486bp) protein (162aa)
GDP-mannose mannosyl hydrolase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H5Y4_9EURY
GDP-mannose mannosyl hydrolase {ECO:0000313|EMBL:ELZ79936.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC
GDP-mannose mannosyl hydrolase
Displaying 13 items

View Taxonomy