ggKbase home page

qs_4_scaffold_233

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_233_1
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(36..1247)
DNA (1212bp) protein (404aa)
IS1341-type transposase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CF34_9EURY
IS1341-type transposase {ECO:0000313|EMBL:ELZ21870.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
IS1341-type transposase
qs_4_scaffold_233_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1385..2029
DNA (645bp) protein (215aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halobacterium sp. DL1 RepID=G4IFW1_9EURY
Sugar transporter {ECO:0000313|EMBL:AHG03516.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sugar transporter
qs_4_scaffold_233_3
unknown

Not on your lists

2140..2760
DNA (621bp) protein (207aa)

This feature has no annotations

qs_4_scaffold_233_4
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2855..4375)
DNA (1521bp) protein (507aa)
FG-GAP repeat-containing protein, possibly sugar-related n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PM90_9EURY
FG-GAP repeat-containing protein, possibly sugar-related
FG-GAP repeat-containing protein, possibly sugar-related {ECO:0000313|EMBL:CCQ32904.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" s
qs_4_scaffold_233_5
unknown

Not on your lists

comp(4785..5243)
DNA (459bp) protein (153aa)

This feature has no annotations

qs_4_scaffold_233_6
unknown

Not on your lists

comp(7157..7726)
DNA (570bp) protein (190aa)

This feature has no annotations

qs_4_scaffold_233_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7701..12689)
DNA (4989bp) protein (1663aa)
Calcium-binding protein (Fragment) n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2DFC2_9EURY
conserved hypothethical protein containg van Willebrand factor type A domain (COG2304)
Calcium-binding protein {ECO:0000313|EMBL:ERJ04792.1}; Flags: Fragment;; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhab
qs_4_scaffold_233_8
unknown

Not on your lists

13220..14665
DNA (1446bp) protein (482aa)

This feature has no annotations

qs_4_scaffold_233_9
unknown

Not on your lists

14662..15333
DNA (672bp) protein (224aa)

This feature has no annotations

qs_4_scaffold_233_10
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15663..16361
DNA (699bp) protein (233aa)
Transposase ISH7 n=2 Tax=Halobacterium salinarum RepID=B0R8J4_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAC82789.1}; Vng6007h {ECO:0000313|EMBL:AAG20706.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacteri
qs_4_scaffold_233_11
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16607..17686
DNA (1080bp) protein (360aa)
Transposase (ISH7) n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WQ08_9EURY
Transposase (ISH7) {ECO:0000313|EMBL:ELY50428.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus
transposase (ISH7)
qs_4_scaffold_233_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18445..18711)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3F066_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61402.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_4_scaffold_233_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18708..19514)
DNA (807bp) protein (269aa)
Deacylase-like protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHZ2_9EURY
Deacylase-like protein {ECO:0000313|EMBL:EJN61401.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
putative deacylase
qs_4_scaffold_233_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19719..21671
DNA (1953bp) protein (651aa)
Flagella assembly protein j n=1 Tax=Halogranum salarium B-1 RepID=J3JH94_9EURY
Flagella assembly protein j {ECO:0000313|EMBL:EJN60794.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
transmembrane protein (type II secretion system proteins TadC)
qs_4_scaffold_233_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21672..22733
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QX96_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90899.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_4_scaffold_233_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22730..23200
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJL0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP88104.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_4_scaffold_233_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23230..23871
DNA (642bp) protein (214aa)
hypothetical protein id=24615899 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88103.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_4_scaffold_233_18
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23864..24334
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A5R5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60798.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_4_scaffold_233_19
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24327..24872
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXA0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90903.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_4_scaffold_233_20
Macaca fascicularis, Macaca, Primates, Mammalia, Chordata, Metazoa

Not on your lists

24980..25996
DNA (1017bp) protein (339aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Macaca fascicularis RepID=G7PZY2_MACFA
Putative uncharacterized protein {ECO:0000313|EMBL:EHH60643.1}; Flags: Fragment;; TaxID=9541 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontogl
qs_4_scaffold_233_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26225..26875
DNA (651bp) protein (217aa)
IS240-type transposase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPC2_NATM8
IS240-type transposase
ISH14-type transposase ISNamo7 {ECO:0000313|EMBL:CCQ35868.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
qs_4_scaffold_233_22
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26906..27322)
DNA (417bp) protein (139aa)
Deoxycytidine triphosphate deaminase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V0A5_HALMA
dcd1; deoxycytidine triphosphate deaminase
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:EMA33886.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula jap
qs_4_scaffold_233_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27514..27807)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNM2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24865.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_233_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28046..28750)
DNA (705bp) protein (235aa)
ArCOG06342 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT60_NATPD
hypothetical protein
ArCOG06342 family protein {ECO:0000313|EMBL:CAI48674.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (
qs_4_scaffold_233_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29210..30130
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CV90_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26337.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_4_scaffold_233_26
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30244..31305
DNA (1062bp) protein (354aa)
Fe2+ transport protein n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q740_9EURY
Fe2+ transport protein {ECO:0000313|EMBL:ERH02318.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
qs_4_scaffold_233_27
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31343..32662
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HRW2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ85854.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
Tat (twin-arginine translocation) pathway signal sequence domain-containing protein
qs_4_scaffold_233_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32962..33996
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK3_NATPD
radA; DNA repair and recombination protein RadA
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
qs_4_scaffold_233_29
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(34042..35103)
DNA (1062bp) protein (354aa)
endA; tRNA-splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=268739 species="Archaea;
tRNA-splicing endonuclease n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLG7_NATM8
qs_4_scaffold_233_30
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(35185..35997)
DNA (813bp) protein (271aa)
DNA topoisomerase type IA zn finger domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQT7_HALUD
DNA topoisomerase type IA zn finger domain protein
DNA topoisomerase type IA zn finger domain protein {ECO:0000313|EMBL:ACV11841.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="
Displaying items 1-30 of 36 in total

View Taxonomy