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qs_4_scaffold_238

Search features with annotation key words

Displaying items 1-30 of 91 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_238_1
unknown

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1..84
DNA (84bp) protein (28aa)

This feature has no annotations

qs_4_scaffold_238_2
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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219..1424
DNA (1206bp) protein (402aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00136}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00136};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00136};; Methionine adenosyltransferase
S-adenosylmethionine synthetase n=1 Tax=Halomicrobium katesii RepID=UPI000377FF08
qs_4_scaffold_238_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1430..2614
DNA (1185bp) protein (395aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiam
Probable tRNA sulfurtransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRK3_9EURY
thiamine biosynthesis protein
qs_4_scaffold_238_4
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2767..3573)
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=M0K6Z2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46703.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qs_4_scaffold_238_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3736..5295
DNA (1560bp) protein (520aa)
chaperonin Cpn60/TCP-1 id=24647732 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Thermosome subunit {ECO:0000313|EMBL:ERH08864.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
chaperonin Cpn60/TCP-1
qs_4_scaffold_238_6

Not on your lists

5408..5728
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YFP5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11936.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
qs_4_scaffold_238_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5769..6452)
DNA (684bp) protein (228aa)
probable S-adenosylmethionine-dependent methyltransferase (homolog to 24-sterol C-methyltransferase) (EC:2.1.1.-)
Probable S-adenosylmethionine-dependent methyltransferase (Homolog to 24-sterol C-methyltransferase) {ECO:0000313|EMBL:CCQ35737.1}; EC=2.1.1.- {ECO:0000313|EMBL:CCQ35737.1};; TaxID=268739 species="Arc
Probable S-adenosylmethionine-dependent methyltransferase (Homolog to 24-sterol C-methyltransferase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP07_NATM8
qs_4_scaffold_238_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6494..7483)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWY1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50081.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
conserved hypothetical membrane protein (DUF369)
qs_4_scaffold_238_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7486..10716)
DNA (3231bp) protein (1077aa)
oligosaccharyl transferase STT3 subunit; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] id=24645604 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative membrane protein required for N-linked glycosylation {ECO:0000313|EMBL:ERH09825.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
transmembrane oligosaccharyl transferase
qs_4_scaffold_238_10
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10901..11446)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KXF3_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA24924.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
qs_4_scaffold_238_11
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11711..13663)
DNA (1953bp) protein (651aa)
MCP domain-containing signal transducer n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JXV1_9EURY
MCP domain-containing signal transducer {ECO:0000313|EMBL:EMA13811.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula s
htr; MCP domain-containing signal transducer
qs_4_scaffold_238_12

Not on your lists

comp(14525..15319)
DNA (795bp) protein (265aa)
Putative transcriptional regulator n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y563_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:ESS06137.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
transcriptional regulator
qs_4_scaffold_238_13
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15540..17858
DNA (2319bp) protein (773aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZL9_HALMD
htr; MCP domain-containing signal transducer
TrII protein {ECO:0000313|EMBL:CAB56464.1}; TaxID=28442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis (Halobacterium v
qs_4_scaffold_238_14
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17858..18556
DNA (699bp) protein (233aa)
Sensory rhodopsin n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPX8_9EURY
sensory rhodopsin
Sensory rhodopsin {ECO:0000313|EMBL:CCQ32442.1}; Sensory rhodopsin-2 protein {ECO:0000313|EMBL:ERJ05019.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
qs_4_scaffold_238_15

Not on your lists

comp(19122..19277)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MQ30_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07799.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_4_scaffold_238_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(19326..19688)
DNA (363bp) protein (121aa)
Transcriptional modulator of MazE/toxin, MazF n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZQ3_HALMD
MazF family transcriptional regulator
Transcriptional modulator of MazE/toxin, MazF {ECO:0000313|EMBL:ACV48821.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Hal
qs_4_scaffold_238_17
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19689..19955)
DNA (267bp) protein (89aa)
AbrB family transcriptional regulator n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JGQ2_9EURY
AbrB family transcriptional regulator {ECO:0000313|EMBL:ELZ87895.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandr
AbrB family transcriptional regulator
qs_4_scaffold_238_18
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20375..20698)
DNA (324bp) protein (108aa)
Transposase n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DWS1_9EURY
Transposase {ECO:0000313|EMBL:ELZ38519.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
transposase
qs_4_scaffold_238_19
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20708..20848
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:CDK40366.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
qs_4_scaffold_238_20
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20884..21267)
DNA (384bp) protein (128aa)
Cupin n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D6H1_9EURY
Cupin {ECO:0000313|EMBL:ELZ30438.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
cupin
qs_4_scaffold_238_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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21340..22173
DNA (834bp) protein (278aa)
Short-chain family oxidoreductase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVI8_9EURY
Short-chain family oxidoreductase {ECO:0000313|EMBL:EFW91251.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pau
short-chain dehydrogenase/reductase SDR
qs_4_scaffold_238_22
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(22492..23616)
DNA (1125bp) protein (375aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
Glycerol-3-phosphate-transporting ATPase {ECO:0000313|EMBL:AEH37945.1}; EC=3.6.3.20 {ECO:0000313|EMBL:AEH37945.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbac
Glycerol-3-phosphate-transporting ATPase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D852_HALXS
qs_4_scaffold_238_23
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(23661..24500)
DNA (840bp) protein (280aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CIF6_KOSOT
binding-protein-dependent transport systems inner membrane component
Tax=BJP_IG2158_Anaerolineales_38_74
qs_4_scaffold_238_24
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(24490..25407)
DNA (918bp) protein (306aa)
Putative ABC transporter permease protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I666_CALAS
ABC transporter permease
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAM00754.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerop
qs_4_scaffold_238_25
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25411..26703)
DNA (1293bp) protein (431aa)
ABC transporter substrate-binding protein n=1 Tax=Kaistia granuli RepID=UPI0003744DE1
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIL36040.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846
family 1 extracellular solute-binding protein
qs_4_scaffold_238_26
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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27039..27818
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halogranum salarium B-1 RepID=J3JFF0_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EJN59199.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
short-chain dehydrogenase/reductase SDR
qs_4_scaffold_238_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27864..28739)
DNA (876bp) protein (292aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA24793.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA24793.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ89_PSEUX
qs_4_scaffold_238_28
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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28908..30416
DNA (1509bp) protein (503aa)
L-xylulose kinase n=1 Tax=Rhizobium loti RepID=UPI0003623118
Carbohydrate kinase {ECO:0000313|EMBL:EHH08463.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorpha
hypothetical protein
qs_4_scaffold_238_29

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comp(31091..31537)
DNA (447bp) protein (149aa)
Transposase n=2 Tax=Archaea RepID=B9LNZ4_HALLT
transposase
Transposase {ECO:0000313|EMBL:AEN05516.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_4_scaffold_238_30
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31621..32052)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DC04_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH35981.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
Displaying items 1-30 of 91 in total

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