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qs_4_scaffold_256

Search features with annotation key words

Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_256_1
unknown

Not on your lists

comp(3..68)
DNA (66bp) protein (22aa)

This feature has no annotations

qs_4_scaffold_256_2
unknown

Not on your lists

comp(219..434)
DNA (216bp) protein (72aa)

This feature has no annotations

qs_4_scaffold_256_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(469..1269)
DNA (801bp) protein (267aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Halomicrobium katesii RepID=UPI000364F169
truA; tRNA pseudouridine synthase A
qs_4_scaffold_256_4
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1347..2219)
DNA (873bp) protein (291aa)
small-conductance mechanosensitive channel id=24618743 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:ERH06350.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius s
mscS; mechanosensitive ion channel
qs_4_scaffold_256_5
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2370..2810)
DNA (441bp) protein (147aa)
MscS Mechanosensitive ion channel n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWT1_9EURY
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CDK39813.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;
MscS Mechanosensitive ion channel
qs_4_scaffold_256_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2893..4194)
DNA (1302bp) protein (434aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1227453 species="Archaea; Eu
Histidine--tRNA ligase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L701_HALJP
histidyl-tRNA synthetase rbh
qs_4_scaffold_256_7
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4256..4852)
DNA (597bp) protein (199aa)
tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase predicted subunit n=2 Tax=Haloarcula hispanica RepID=G0HT52_HALHT
tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase subunit
tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase {ECO:0000313|EMBL:AHB64884.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
qs_4_scaffold_256_8
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4853..5203)
DNA (351bp) protein (117aa)
DNA-binding protein C443_10692 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KRP7_HALAR
DNA-binding protein C443_10692 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argen
hypothetical protein
qs_4_scaffold_256_9
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5212..5694)
DNA (483bp) protein (161aa)
30S ribosomal protein S19e n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L5R0_HALJP
rps19E; 30S ribosomal protein S19
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentine
qs_4_scaffold_256_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5911..6777
DNA (867bp) protein (289aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase {ECO:0000313|EMBL:ACV47418.1}; EC=2.7.4.16 {ECO:0000313|EMBL:ACV47418.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
thiamine-monophosphate kinase n=1 Tax=Halomicrobium katesii RepID=UPI00036A3CB1
qs_4_scaffold_256_11
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7047..8219)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JWV1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA12110.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
qs_4_scaffold_256_12
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8296..8544)
DNA (249bp) protein (83aa)
Uncharacterized protein n=9 Tax=Haloarcula RepID=G0HT46_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA00758.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
qs_4_scaffold_256_13
unknown

Not on your lists

comp(8620..8769)
DNA (150bp) protein (50aa)

This feature has no annotations

qs_4_scaffold_256_14
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8954..9514
DNA (561bp) protein (187aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055191}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055
Uridylate kinase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KMN4_HALAR
uridylate kinase
qs_4_scaffold_256_15
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9515..11158
DNA (1644bp) protein (548aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1227452 species="Archaea; Euryarcha
Lysine--tRNA ligase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KH07_9EURY
lysyl-tRNA synthetase
qs_4_scaffold_256_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11436..13199
DNA (1764bp) protein (588aa)
M50 metallopeptidase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IXF9_HALVA
metalloprotease
M50 metallopeptidase {ECO:0000313|EMBL:EMA00753.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29
qs_4_scaffold_256_17
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


13252..14994
DNA (1743bp) protein (581aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1227453 species="Archaea; Eury
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LA92_HALJP
qs_4_scaffold_256_18
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15000..15797)
DNA (798bp) protein (266aa)
Cell division ATPase MinD / septum site-determining protein MinD n=3 Tax=Haloarcula RepID=G0HT37_HALHT
septum formation initiator
Septum formation initiator {ECO:0000313|EMBL:AHB64869.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N60
qs_4_scaffold_256_19
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16059..17315
DNA (1257bp) protein (419aa)
Peptide chain release factor subunit 1 n=2 Tax=Haloarcula RepID=M0JUS3_9EURY
peptide chain release factor 1 rbh
Peptide chain release factor subunit 1 {ECO:0000256|HAMAP-Rule:MF_00424}; Translation termination factor aRF1 {ECO:0000256|HAMAP-Rule:MF_00424}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacte
qs_4_scaffold_256_20
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17450..17842)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KM38_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA22432.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
qs_4_scaffold_256_21
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17875..18567)
DNA (693bp) protein (231aa)
atpD; V-type ATP synthase subunit D (EC:3.6.3.14) rbh
V-type ATP synthase subunit D n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KE38_9EURY
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
qs_4_scaffold_256_22
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18820..19575)
DNA (756bp) protein (252aa)
Rhodopsin n=3 Tax=Haloarcula RepID=V5TJJ0_HALHI
rhodopsin
Rhodopsin {ECO:0000313|EMBL:AHB64865.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
qs_4_scaffold_256_23
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19686..21095)
DNA (1410bp) protein (470aa)
ntpB; V-type ATP synthase subunit B (EC:3.6.3.14) rbh
V-type ATP synthase beta chain n=3 Tax=Haloarcula RepID=VATB_HALMA
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
qs_4_scaffold_256_24
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21098..22858)
DNA (1761bp) protein (587aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1592728 species="Archaea;
V-type ATP synthase alpha chain n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IXE9_HALVA
ATP synthase subunit alpha
qs_4_scaffold_256_25
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22862..23185)
DNA (324bp) protein (108aa)
atpF; V-type ATP synthase subunit F (EC:3.6.3.14)
V-type ATP synthase subunit F n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JVZ6_9EURY
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qs_4_scaffold_256_26
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23182..24258)
DNA (1077bp) protein (359aa)
ntpC; V-type ATP synthase subunit C (EC:3.6.3.14) rbh
V-type ATP synthase subunit C n=3 Tax=Haloarcula RepID=Q5UXZ0_HALMA
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qs_4_scaffold_256_27
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24255..24839)
DNA (585bp) protein (195aa)
atpE; V-type ATP synthase subunit E (EC:3.6.3.14) rbh
V-type proton ATPase subunit E n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IZ57_HALVA
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
qs_4_scaffold_256_28
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24859..25254)
DNA (396bp) protein (132aa)
atpC1; H+ ATP synthase sununit C (EC:3.6.3.14)
H+ ATP synthase sununit C n=6 Tax=Haloarcula RepID=Q5UXZ2_HALMA
H+ ATP synthase sununit C {ECO:0000313|EMBL:EMA17700.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATC
qs_4_scaffold_256_29
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25316..27568)
DNA (2253bp) protein (751aa)
ATP synthase subunit I n=2 Tax=Haloarcula hispanica RepID=V5TIB9_HALHI
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1
ATP synthase subunit I
qs_4_scaffold_256_30
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27555..27887)
DNA (333bp) protein (111aa)
atpG; vacuolar (H+)-ATPase G subunit (EC:3.6.3.14)
Vacuolar (H+)-ATPase G subunit n=2 Tax=Haloarcula RepID=Q5UXZ4_HALMA
Vacuolar (H+)-ATPase G subunit {ECO:0000313|EMBL:EMA12134.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensi
Displaying items 1-30 of 61 in total

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