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qs_4_scaffold_261

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_261_1
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1160..1369
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LN86_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM56824.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qs_4_scaffold_261_2
unknown

Not on your lists

1647..2060
DNA (414bp) protein (138aa)

This feature has no annotations

qs_4_scaffold_261_trna_3
unknown

Not on your lists

comp(2581..2652)
DNA (72bp)
transferRNA
qs_4_scaffold_261_3
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2786..3097)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=4 Tax=Haloarcula RepID=G0HS82_HALHT
rps10p; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
qs_4_scaffold_261_4
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3101..4366)
DNA (1266bp) protein (422aa)
tef1A; translation elongation factor EF-1 subunit alpha (EC:3.6.5.3)
Elongation factor 1-alpha n=4 Tax=Haloarcula RepID=G0HS83_HALHT
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
qs_4_scaffold_261_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4566..5519)
DNA (954bp) protein (318aa)
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=2 Tax=Haloarcula hispanica RepID=G0HS84_HALHT
Homoserine dehydrogenase {ECO:0000313|EMBL:AHB67147.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.
qs_4_scaffold_261_6
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5516..6049)
DNA (534bp) protein (178aa)
Amino acid-binding ACT domain protein n=3 Tax=Haloarcula RepID=G0HS85_HALHT
amino acid-binding protein
Amino acid-binding protein {ECO:0000313|EMBL:AHB67148.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N60
qs_4_scaffold_261_7
unknown

Not on your lists

6198..7178
DNA (981bp) protein (327aa)

This feature has no annotations

qs_4_scaffold_261_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7179..8261
DNA (1083bp) protein (361aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIF3_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ22418.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ABC-type transport system permease protein
qs_4_scaffold_261_9
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8254..8925
DNA (672bp) protein (224aa)
ABC transporter n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WW25_9EURY
ABC transporter {ECO:0000313|EMBL:ELY52528.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus JC
ABC-type multidrug transport system, ATPase component
qs_4_scaffold_261_10
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8922..9143)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HS86_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM58423.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
qs_4_scaffold_261_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9255..11441)
DNA (2187bp) protein (729aa)
Elongation factor 2 n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LPG8_HALJP
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Haloba
fusA; elongation factor EF-2 rbh
qs_4_scaffold_261_12
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11591..12535
DNA (945bp) protein (315aa)
E3 Ubiquitin ligase n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z4K0_9GAMM
E3 Ubiquitin ligase {ECO:0000313|EMBL:EIC20257.1}; Flags: Precursor;; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thior
hypothetical protein
qs_4_scaffold_261_13
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12586..13332
DNA (747bp) protein (249aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5UZS5_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA15122.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
qs_4_scaffold_261_14
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13329..14042)
DNA (714bp) protein (238aa)
Cobalt transport protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KJK8_HALAR
Cobalt transport protein {ECO:0000313|EMBL:EMA19990.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis D
cobalt ABC transporter permease
qs_4_scaffold_261_15
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14036..14740)
DNA (705bp) protein (235aa)
Cobalt transport ATP-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JST4_HALVA
Cobalt transport ATP-binding protein {ECO:0000313|EMBL:EMA10999.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vall
ABC transporter ATP-binding protein rbh
qs_4_scaffold_261_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14737..15321)
DNA (585bp) protein (195aa)
Dethiobiotin synthesis protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JTL6_HALVA
Dethiobiotin synthesis protein {ECO:0000313|EMBL:EMA11000.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismort
bioY; dethiobiotin synthesis protein
qs_4_scaffold_261_17
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15539..16150)
DNA (612bp) protein (204aa)
30S ribosomal protein S7 n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JPH4_HALVA
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
rps7P; 30S ribosomal protein S7P
qs_4_scaffold_261_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16153..16581)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGL6_9EURY
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
30S ribosomal protein S12
qs_4_scaffold_261_19
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16739..17164)
DNA (426bp) protein (142aa)
Transcription termination factor NusA n=3 Tax=Haloarcula RepID=Q5UZR6_HALMA
nusA; transcription elongation factor NusA-like protein
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
qs_4_scaffold_261_20
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17164..19815)
DNA (2652bp) protein (884aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:CCQ32814.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CCQ32814.1};; DNA-directed RNA polymerase subunit A'' protein {ECO:0000313|EMBL:ERJ07195.1}; EC=2.7.7.
DNA-directed RNA polymerase subunit A n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP17_9EURY
qs_4_scaffold_261_21
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19817..22774)
DNA (2958bp) protein (986aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
rpoA; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) rbh
DNA-directed RNA polymerase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KZS6_9EURY
qs_4_scaffold_261_22
Halomicroarcula pellucida, Halomicroarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22771..24597)
DNA (1827bp) protein (609aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1427151 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
rpoB; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Halomicroarcula pellucida RepID=L0N441_9EURY
qs_4_scaffold_261_23
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24599..26164)
DNA (1566bp) protein (522aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:EMA11009.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA11009.1};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit B'' (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit B n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JSU5_HALVA
qs_4_scaffold_261_24
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26164..26391)
DNA (228bp) protein (76aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JTM4_HALVA
qs_4_scaffold_261_25
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26630..27013
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PJG8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG92321.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qs_4_scaffold_261_26
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27095..28153)
DNA (1059bp) protein (353aa)
Transcriptional regulator n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NT98_HALBP
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ADQ68195.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquen
qs_4_scaffold_261_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28219..29367)
DNA (1149bp) protein (383aa)
Carbohydrate ABC transporter ATP-binding protein, cut1 family n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZD2_9EURY
Carbohydrate ABC transporter ATP-binding protein, cut1 family {ECO:0000313|EMBL:EMA50663.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
ABC transporter
qs_4_scaffold_261_28
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29393..30319)
DNA (927bp) protein (309aa)
ABC-type sugar transport system, permease component n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PQI3_9EURY
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERG94591.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="
ABC-type transport system permease protein (probable substrate sugar)
qs_4_scaffold_261_29
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30316..31305)
DNA (990bp) protein (330aa)
ABC-type sugar transport system, permease component n=1 Tax=Halonotius sp. J07HN4 RepID=U1QG31_9EURY
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERH05773.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Hal
ABC-type transport system permease protein (probable substrate sugar)
Displaying items 1-30 of 75 in total

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