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qs_4_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 135 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_3_1
unknown

Not on your lists

comp(149..304)
DNA (156bp) protein (52aa)

This feature has no annotations

qs_4_scaffold_3_2
Micromonas pusilla, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

315..1130
DNA (816bp) protein (272aa)
Uroporphyrinogen decarboxylase {ECO:0000256|RuleBase:RU000554}; EC=4.1.1.37 {ECO:0000256|RuleBase:RU000554};; TaxID=564608 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophycea
Uroporphyrinogen decarboxylase n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1ML71_MICPC
hemE; uroporphyrinogen decarboxylase
qs_4_scaffold_3_3
Micromonas pusilla, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(1223..1432)
DNA (210bp) protein (70aa)
Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1MRS7_MICPC
Predicted protein {ECO:0000313|EMBL:EEH57017.1}; TaxID=564608 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Micromona
hypothetical protein
qs_4_scaffold_3_4
unknown

Not on your lists

1473..1685
DNA (213bp) protein (71aa)

This feature has no annotations

qs_4_scaffold_3_5
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

2050..3858
DNA (1809bp) protein (603aa)
PREDICTED: putative ribosomal RNA methyltransferase NOP2-like n=1 Tax=Solanum lycopersicum RepID=UPI0002BCA20B
RNA (C5-cytosine) methyltransferase {ECO:0000313|EMBL:CEF96944.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
proliferating-cell nucleolar antigen P120
qs_4_scaffold_3_6
unknown

Not on your lists

4388..4636
DNA (249bp) protein (83aa)

This feature has no annotations

qs_4_scaffold_3_7
unknown

Not on your lists

comp(4650..4865)
DNA (216bp) protein (72aa)

This feature has no annotations

qs_4_scaffold_3_8
unknown

Not on your lists

comp(4855..5154)
DNA (300bp) protein (100aa)

This feature has no annotations

qs_4_scaffold_3_9
unknown

Not on your lists

comp(5608..5949)
DNA (342bp) protein (114aa)

This feature has no annotations

qs_4_scaffold_3_10
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6465..8201)
DNA (1737bp) protein (579aa)
transketolase (EC:2.2.1.1)
Transketolase {ECO:0000313|EMBL:AFZ42754.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AFZ42754.1};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece
Transketolase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y7H5_HALP7
qs_4_scaffold_3_11
Ostreococcus 'lucimarinus', Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(8146..8658)
DNA (513bp) protein (171aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=436017 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Ba
transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) RepID=A4S0R4_OSTLU
qs_4_scaffold_3_12
Coccomyxa subellipsoidea, Coccomyxa, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(9694..10482)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0YK52_9CHLO
Uncharacterized protein {ECO:0000313|EMBL:EIE18771.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subellipsoidea C-169
hypothetical protein
qs_4_scaffold_3_13
unknown

Not on your lists

10496..11104
DNA (609bp) protein (203aa)

This feature has no annotations

qs_4_scaffold_3_14
unknown

Not on your lists

11058..11675
DNA (618bp) protein (206aa)

This feature has no annotations

qs_4_scaffold_3_15
unknown

Not on your lists

12058..13080
DNA (1023bp) protein (341aa)

This feature has no annotations

qs_4_scaffold_3_16
Micromonas sp. RCC299, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

13239..14282
DNA (1044bp) protein (348aa)
Predicted protein n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1EI02_MICSR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO67772.1}; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Mic
qs_4_scaffold_3_17
Tetraselmis sp. GSL018, Tetraselmis, Chlorodendrales, Chlorodendrophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(14336..15610)
DNA (1275bp) protein (425aa)
Amino Acid/Auxin permease family n=1 Tax=Bathycoccus prasinos RepID=K8EQ14_9CHLO
Amino acid auxin permease family {ECO:0000313|EMBL:JAC78131.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" sour
AAAP family transporter: amino acid
qs_4_scaffold_3_18
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

15690..16811
DNA (1122bp) protein (374aa)
COG0465: ATP-dependent Zn proteases (ISS) (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q00YT8_OSTTA
P-loop containing nucleoside triphosphate hydrolase {ECO:0000313|EMBL:CEF99656.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccace
ATP-dependent metalloprotease FtsH
qs_4_scaffold_3_19
Micromonas pusilla, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

16818..17075
DNA (258bp) protein (86aa)
Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1N140_MICPC
Predicted protein {ECO:0000313|EMBL:EEH54373.1}; Flags: Fragment;; TaxID=564608 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;"
ATP-dependent metalloprotease FtsH
qs_4_scaffold_3_20
Tetraselmis sp. GSL018, Tetraselmis, Chlorodendrales, Chlorodendrophyceae, Chlorophyta, Viridiplantae

Not on your lists

17268..18167
DNA (900bp) protein (300aa)
AAA-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0YR02_9CHLO
Aaa-domain-containing protein {ECO:0000313|EMBL:JAC70422.1}; Flags: Fragment;; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetr
metalloprotease FtsH
qs_4_scaffold_3_21
unknown

Not on your lists

18242..19105
DNA (864bp) protein (288aa)

This feature has no annotations

qs_4_scaffold_3_22
Monoraphidium neglectum, Monoraphidium, Sphaeropleales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(19231..19923)
DNA (693bp) protein (231aa)
Eukaryotic translation initiation factor 6 n=1 Tax=Volvox carteri RepID=D8TQW4_VOLCA
Eukaryotic translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_03132}; Short=eIF-6 {ECO:0000256|HAMAP-Rule:MF_03132};; TaxID=145388 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae
translation initiation factor 6
qs_4_scaffold_3_23
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(20250..21059)
DNA (810bp) protein (270aa)
Predicted protein n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1E361_MICSR
Photosystem II Psp29, biogenesis {ECO:0000313|EMBL:CEF97146.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;"
inositol phosphatase
qs_4_scaffold_3_24
unknown

Not on your lists

21891..23081
DNA (1191bp) protein (397aa)

This feature has no annotations

qs_4_scaffold_3_25
unknown

Not on your lists

23391..24266
DNA (876bp) protein (292aa)

This feature has no annotations

qs_4_scaffold_3_26
Thermus aquaticus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(24483..25280)
DNA (798bp) protein (266aa)
Ribosome-recycling factor n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A6B2_THEAQ
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=498848 species="Bacteria;
frr; ribosome recycling factor
qs_4_scaffold_3_27
unknown

Not on your lists

25439..25969
DNA (531bp) protein (177aa)

This feature has no annotations

qs_4_scaffold_3_28
Zea mays, Zea, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

26006..26803
DNA (798bp) protein (266aa)
Cytosolic Fe-S cluster assembly factor NBP35 n=2 Tax=Zea mays RepID=B4FU40_MAIZE
Cytosolic Fe-S cluster assembly factor NBP35 {ECO:0000256|HAMAP-Rule:MF_03038}; TaxID=4577 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Lil
ParA/MinD-like ATPase
qs_4_scaffold_3_29
unknown

Not on your lists

26849..27220
DNA (372bp) protein (124aa)

This feature has no annotations

qs_4_scaffold_3_30
Cricetulus griseus, Cricetulus, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

comp(27264..27527)
DNA (264bp) protein (88aa)
PREDICTED: phenylalanyl-tRNA synthetase beta chain isoform 3 n=1 Tax=Cricetulus griseus RepID=UPI00022F652F
Suspect SCG annotation. See neighboring gene [qs_4_scaffold_3_31].
Farsb; phenylalanyl-tRNA synthetase, beta subunit
Phenylalanyl-tRNA synthetase beta chain {ECO:0000313|EMBL:EGW13166.1}; TaxID=10029 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glir
Displaying items 1-30 of 135 in total

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