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qs_4_scaffold_333

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_333_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..123)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SNY3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ07125.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qs_4_scaffold_333_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

249..1037
DNA (789bp) protein (263aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L0L3_9EURY
rrmJ; 23S rRNA methyltransferase
qs_4_scaffold_333_3
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1337..2149
DNA (813bp) protein (271aa)
CRISPR-associated protein Cas6 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNV6_HALUD
CRISPR-associated protein Cas6
CRISPR-associated protein Cas6 {ECO:0000313|EMBL:ACV11631.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensi
qs_4_scaffold_333_4
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2136..4247
DNA (2112bp) protein (704aa)
CRISPR-associated protein Csh1 family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNQ1_9EURY
CRISPR-associated protein Cas8b/Csh1 {ECO:0000313|EMBL:AKH97357.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanae
CRISPR-associated protein, Csh1
qs_4_scaffold_333_5
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4250..5317
DNA (1068bp) protein (356aa)
CRISPR-associated protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0B431_9EURY
CRISPR-associated protein Cas7/Csh2 {ECO:0000313|EMBL:AKH97358.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaer
CRISPR-associated protein, Csh2 family
qs_4_scaffold_333_6
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5320..6117
DNA (798bp) protein (266aa)
CRISPR-associated protein Cas5 Hmari subtype n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PHG7_9EURY
CRISPR-associated protein Cas5 {ECO:0000313|EMBL:AKH97359.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarch
CRISPR-associated protein, Cas5h
qs_4_scaffold_333_7
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6212..8716
DNA (2505bp) protein (835aa)
CRISPR-associated helicase Cas3 family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6D8M3_9EURY
CRISPR-associated protein Cas3 {ECO:0000313|EMBL:AKH97360.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarch
CRISPR-associated helicase, Cas3
qs_4_scaffold_333_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8719..9279
DNA (561bp) protein (187aa)
CRISPR-associated protein Cas4 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNP7_9EURY
CRISPR-associated protein, Cas4a
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ERJ06794.1}; CRISPR-associated protein, Cas4a {ECO:0000313|EMBL:CCQ33717.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
qs_4_scaffold_333_9
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9282..10274
DNA (993bp) protein (331aa)
CRISPR-associated endonuclease Cas1 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNV0_HALUD
CRISPR-associated protein Cas1 {ECO:0000313|EMBL:AKH97362.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarch
CRISPR-associated protein Cas1
qs_4_scaffold_333_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10276..10539
DNA (264bp) protein (88aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2E4C3_9EURY
CRISPR-associated protein Cas2
qs_4_scaffold_333_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15477..16004)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJ64_9EURY
qs_4_scaffold_333_12
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16515..17183)
DNA (669bp) protein (223aa)
Molybdenum cofactor biosynthesis protein B n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VZK7_9EURY
molybdenum cofactor biosynthesis protein B
Molybdenum cofactor biosynthesis protein B {ECO:0000313|EMBL:AGN01681.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchae
qs_4_scaffold_333_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17507..18229)
DNA (723bp) protein (241aa)
hypothetical protein id=24647677 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:EMA32665.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_4_scaffold_333_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18297..19628)
DNA (1332bp) protein (444aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=halophilic archaeon J07HX64 RepID=U1QST4_9EURY
tRNA pseudouridine synthase D
qs_4_scaffold_333_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19750..20445)
DNA (696bp) protein (232aa)
proteasome endopeptidase complex protein (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000255|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000255|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
proteasome subunit beta n=1 Tax=Halomicrobium katesii RepID=UPI0003669C8E
qs_4_scaffold_333_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20438..21178)
DNA (741bp) protein (247aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVQ5_HALMD
qs_4_scaffold_333_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21321..21659)
DNA (339bp) protein (113aa)
peptidyl-tRNA hydrolase, PTH2 family (EC:3.1.1.29) id=24649061 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:ERH10194.1}; EC=3.1.1.29 {ECO:0000313|EMBL:ERH10194.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic ar
peptidyl-tRNA hydrolase (EC:3.1.1.29)
qs_4_scaffold_333_18
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21817..23835
DNA (2019bp) protein (673aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5V4J6_HALMA
ATPase
ATPase {ECO:0000313|EMBL:AJF26643.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_4_scaffold_333_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23896..24540)
DNA (645bp) protein (215aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK56_9EURY
qs_4_scaffold_333_trna_1
unknown

Not on your lists

24732..24806
DNA (75bp)
transferRNA
qs_4_scaffold_333_20

Not on your lists

comp(24954..25865)
DNA (912bp) protein (304aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XDZ4_9ARCH
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ESS06199.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
nucleoside-diphosphate sugar epimerase
qs_4_scaffold_333_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26355..26489)
DNA (135bp) protein (45aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXG7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90970.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qs_4_scaffold_333_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26585..28657)
DNA (2073bp) protein (691aa)
Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PFH8_9EURY
Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain protein {ECO:0000313|EMBL:ERH09166.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" sourc
OB-fold tRNA/helicase-type nucleic acid binding-protein
qs_4_scaffold_333_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28759..29022)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003670196
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48309.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_333_24
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29192..29920
DNA (729bp) protein (243aa)
DNA binding protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9V3L6_HALBP
DNA binding protein {ECO:0000313|EMBL:ELY31795.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (st
DNA binding protein
qs_4_scaffold_333_25

Not on your lists

30038..31135
DNA (1098bp) protein (366aa)
Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=halophilic archaeon DL31 RepID=G2MMI1_9ARCH
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:AEN06380.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_4_scaffold_333_26
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31168..32115)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JAM2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA06167.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
Displaying 27 items

View Taxonomy