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qs_4_scaffold_39

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Displaying items 1-30 of 76 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_39_trna_2
unknown

Not on your lists

comp(616..686)
DNA (71bp)
transferRNA
qs_4_scaffold_39_1
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(737..1627)
DNA (891bp) protein (297aa)
truB; H/ACA RNA-protein complex component Cbf5p/tRNA pseudouridine synthase B (EC:5.4.99.12)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
tRNA pseudouridine synthase B n=2 Tax=Haloarcula hispanica RepID=V5TIS8_HALHI
qs_4_scaffold_39_2
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1631..2209)
DNA (579bp) protein (193aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JY07_9EURY
qs_4_scaffold_39_3
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2249..3136)
DNA (888bp) protein (296aa)
HTR-like protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KEX6_9EURY
HTR-like protein {ECO:0000313|EMBL:EMA19756.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 13557.;
HtlB
qs_4_scaffold_39_4
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3171..3821)
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L8D8_HALJP
adenylate kinase
qs_4_scaffold_39_5
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3853..4149
DNA (297bp) protein (99aa)
Peroxiredoxin n=1 Tax=Halonotius sp. J07HN4 RepID=U1QHR8_9EURY
Peroxiredoxin {ECO:0000313|EMBL:ERH06388.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
peroxiredoxin
qs_4_scaffold_39_6
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4583..5911)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JWS1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA12853.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein rbh
qs_4_scaffold_39_7
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5923..8145)
DNA (2223bp) protein (741aa)
Signal-transducing histidine kinase-like protein n=2 Tax=Haloarcula hispanica RepID=G0HUG1_HALHT
kinA1; signal-transducing histidine kinase-like protein rbh
Signal-transducing histidine kinase-like protein {ECO:0000313|EMBL:AEM56212.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Hal
qs_4_scaffold_39_8
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8269..9144
DNA (876bp) protein (292aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384};; TaxID=12
Homoserine kinase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KMW5_HALAR
homoserine kinase
qs_4_scaffold_39_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9141..9719)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037AE5B5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47754.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_39_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9829..11079
DNA (1251bp) protein (417aa)
NADH oxidase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L571_HALJP
NADH oxidase {ECO:0000313|EMBL:EMA28732.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
NADH oxidase
qs_4_scaffold_39_11
unknown

Not on your lists

11155..11364
DNA (210bp) protein (70aa)

This feature has no annotations

qs_4_scaffold_39_12
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11784..12203
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KMW1_HALAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA22268.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
qs_4_scaffold_39_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12262..13092
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L8C8_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28729.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
qs_4_scaffold_39_14
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13152..13688
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYR4_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA00924.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_4_scaffold_39_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13799..14056
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000366C855
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47747.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_39_16
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14179..17421
DNA (3243bp) protein (1081aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210
Carbamoyl-phosphate synthase large chain n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KMV6_HALAR
carbamoyl phosphate synthase large subunit
qs_4_scaffold_39_17

Not on your lists

17568..18017
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Archaea RepID=U1QE46_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESS12741.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
qs_4_scaffold_39_18
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18200..19246)
DNA (1047bp) protein (349aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L583_HALJP
carbamoyl phosphate synthase
qs_4_scaffold_39_19
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19349..19762
DNA (414bp) protein (138aa)
Transcription regulator n=3 Tax=Haloarcula RepID=G0HUH5_HALHT
trh2; transcription regulator
Transcription regulator {ECO:0000313|EMBL:EMA28720.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
qs_4_scaffold_39_20
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19963..22284)
DNA (2322bp) protein (774aa)
ATP-dependent helicase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KM74_HALAR
ATP-dependent helicase {ECO:0000313|EMBL:EMA22256.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM
DEAD/DEAH box helicase
qs_4_scaffold_39_21
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22357..23556)
DNA (1200bp) protein (400aa)
NADH dehydrogenase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K9L6_9EURY
NADH dehydrogenase
NADH dehydrogenase {ECO:0000313|EMBL:AJF24716.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_4_scaffold_39_22
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23604..24578)
DNA (975bp) protein (325aa)
dmd; diphosphomevalonate decarboxylase (EC:4.1.1.33)
Diphosphomevalonate decarboxylase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JMW3_9EURY
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:EMA09693.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula califor
qs_4_scaffold_39_23
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(24725..26395)
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B5D253
peptidase C14 caspase catalytic subunit P20 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
bacterial pre-peptidase C-terminal domain protein
qs_4_scaffold_39_24
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26648..26821
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Haloarcula hispanica N601 RepID=V5TM87_HALHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB65780.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
qs_4_scaffold_39_25
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26825..27361)
DNA (537bp) protein (179aa)
ATP/cobalamin adenosyltransferase n=2 Tax=Haloarcula hispanica RepID=G0HVN5_HALHT
ATP:cob(I)alamin adenosyltransferase
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:AEM57657.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispani
qs_4_scaffold_39_26
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27498..29078
DNA (1581bp) protein (527aa)
purH; bifunctional purine biosynthesis protein PurH (EC:2.1.2.2 2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KV63_HALAR
Bifunctional purine biosynthesis protein PurH {ECO:0000313|EMBL:EMA23620.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloa
qs_4_scaffold_39_27
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29145..29435
DNA (291bp) protein (97aa)
Putative transporter n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KK04_9EURY
Putative transporter {ECO:0000313|EMBL:EMA21471.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 135
transporter
qs_4_scaffold_39_28
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29447..29938
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L8D7_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29826.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_4_scaffold_39_29
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29983..30513
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JI44_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA07669.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
Displaying items 1-30 of 76 in total

View Taxonomy