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qs_4_scaffold_488

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_488_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..522
DNA (522bp) protein (174aa)
IS1341-type transposase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRI9_9EURY
IS1341-type transposase {ECO:0000313|EMBL:EMA47055.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
IS1341-type transposase
qs_4_scaffold_488_2
unknown

Not on your lists

610..882
DNA (273bp) protein (91aa)

This feature has no annotations

qs_4_scaffold_488_3
unknown

Not on your lists

1131..1709
DNA (579bp) protein (193aa)

This feature has no annotations

qs_4_scaffold_488_4
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1719..3275)
DNA (1557bp) protein (519aa)
Multifunctional CCA protein {ECO:0000313|EMBL:ERJ05108.1}; EC=2.7.7.72 {ECO:0000313|EMBL:ERJ05108.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
Multifunctional CCA protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2DY58_9EURY
polynucleotide adenylyltransferase region
qs_4_scaffold_488_5
unknown

Not on your lists

comp(3398..4048)
DNA (651bp) protein (217aa)

This feature has no annotations

qs_4_scaffold_488_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4366..4842)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TRX9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG92709.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qs_4_scaffold_488_7
unknown

Not on your lists

5189..5374
DNA (186bp) protein (62aa)

This feature has no annotations

qs_4_scaffold_488_8
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5450..6721)
DNA (1272bp) protein (424aa)
transposase IS605 n=1 Tax=Halorubrum sp. T3 RepID=UPI00035CD8BF
IS1341-type transposase {ECO:0000313|EMBL:EMA69856.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
transposase, IS605 OrfB family, central region
qs_4_scaffold_488_9
unknown

Not on your lists

7004..7246
DNA (243bp) protein (81aa)

This feature has no annotations

qs_4_scaffold_488_10
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7511..8383)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YZL5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY79534.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
hypothetical protein
qs_4_scaffold_488_11
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8531..9331)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JRS3_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33939.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
qs_4_scaffold_488_12
unknown

Not on your lists

9668..10336
DNA (669bp) protein (223aa)

This feature has no annotations

qs_4_scaffold_488_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10462..11217)
DNA (756bp) protein (252aa)
2-phosphosulfolactate phosphatase {ECO:0000313|EMBL:CCQ33576.1}; Putative 2-phosphosulfolactate phosphatase protein {ECO:0000313|EMBL:ERJ05462.1}; EC=3.1.3.71 {ECO:0000313|EMBL:ERJ05462.1};; TaxID=103
2-phosphosulfolactate phosphatase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJC0_9EURY
2-phosphosulfolactate phosphatase
qs_4_scaffold_488_14
unknown

Not on your lists

11351..11611
DNA (261bp) protein (87aa)

This feature has no annotations

qs_4_scaffold_488_15
unknown

Not on your lists

comp(11630..11860)
DNA (231bp) protein (77aa)

This feature has no annotations

qs_4_scaffold_488_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12006..14045)
DNA (2040bp) protein (680aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N269_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52017.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_4_scaffold_488_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14045..15697)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NER6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56472.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_4_scaffold_488_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15705..16694)
DNA (990bp) protein (330aa)
LtrC-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CC69_9EURY
LtrC-like protein {ECO:0000313|EMBL:ELZ20835.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ltrC; LtrC-like protein
qs_4_scaffold_488_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16953..17390
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55052.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_4_scaffold_488_20
unknown

Not on your lists

17448..17678
DNA (231bp) protein (77aa)

This feature has no annotations

qs_4_scaffold_488_21
unknown

Not on your lists

comp(18244..18507)
DNA (264bp) protein (88aa)

This feature has no annotations

qs_4_scaffold_488_22
Chondrus crispus, Chondrus, Gigartinales, Florideophyceae, Eukaryota

Not on your lists

18810..20375
DNA (1566bp) protein (522aa)
PREDICTED: protein FAM171A1 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C101D0
Stackhouse genomic scaffold, scaffold_50 {ECO:0000313|EMBL:CDF39748.1}; TaxID=2769 species="Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigartinaceae; Chondrus.;" source="Chondrus crispus (C
qs_4_scaffold_488_23
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20751..21626)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2DP29_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ07402.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qs_4_scaffold_488_24
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21699..22412)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWD1_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58521.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qs_4_scaffold_488_25
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22561..23019
DNA (459bp) protein (153aa)
Putative DNA-binding protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2DZA2_9EURY
Putative DNA-binding protein {ECO:0000313|EMBL:ERJ05116.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea
qs_4_scaffold_488_26

Not on your lists

comp(23471..24763)
DNA (1293bp) protein (431aa)
Conserved protein n=1 Tax=Environmental halophage 1 AAJ-2005 RepID=Q2XUY8_9VIRU
Conserved protein {ECO:0000313|EMBL:ABB77914.1}; TaxID=432371 species="Viruses; unclassified phages; environmental samples.;" source="Environmental halophage 1 AAJ-2005.;"
qs_4_scaffold_488_27
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24874..25086)
DNA (213bp) protein (71aa)
UDP-sugar hydrolase / 5'-nucleotidase n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G2N9_9EURY
UDP-sugar hydrolase / 5'-nucleotidase {ECO:0000313|EMBL:ELZ65079.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahoven
Displaying 27 items

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