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qs_4_scaffold_581

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_581_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..1245)
DNA (1245bp) protein (415aa)
Electron-transferring-flavoprotein dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKF6_9EURY
Electron-transferring-flavoprotein dehydrogenase {ECO:0000313|EMBL:EMA46136.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
FAD-dependent oxidoreductase (homolog to geranylgeranyl reductase)
qs_4_scaffold_581_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1381..2511)
DNA (1131bp) protein (377aa)
mandelate racemase/muconate lactonizing protein id=24613559 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ESP90192.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" s
2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase
qs_4_scaffold_581_3
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2696..4072
DNA (1377bp) protein (459aa)
Major facilitator superfamily protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W6E4_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:ELY43913.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum ti
major facilitator superfamily protein
qs_4_scaffold_581_4
unknown

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4384..4608
DNA (225bp) protein (75aa)

This feature has no annotations

qs_4_scaffold_581_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5357..6166)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43097.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_581_6
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6376..7101
DNA (726bp) protein (242aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Natronococcus occultus SP4 RepID=L0K6K3_9EURY
enoyl-CoA hydratase/carnithine racemase
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:AGB39989.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus o
qs_4_scaffold_581_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7162..7335
DNA (174bp) protein (58aa)
F420-dependent oxidoreductase, G6PDH family protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSU2_9EURY
F420-dependent oxidoreductase, G6PDH family protein {ECO:0000313|EMBL:EFW92501.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source
G6PDH family F420-dependent oxidoreductase
qs_4_scaffold_581_8
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7427..7594)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZ22_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB61990.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
qs_4_scaffold_581_9
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7638..9176
DNA (1539bp) protein (513aa)
Formyl-CoA transferase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XGQ6_9EURY
Formyl-CoA transferase {ECO:0000313|EMBL:ELY60900.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 1879
Formyl-CoA transferase
qs_4_scaffold_581_10
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9791..10723
DNA (933bp) protein (311aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JLR8_NATP1
putative nucleoside-diphosphate sugar epimerase
Putative nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AGB31778.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;"
qs_4_scaffold_581_11
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10804..12105
DNA (1302bp) protein (434aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W5W3_9EURY
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ELY44854.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natro
acyl-CoA dehydrogenase
qs_4_scaffold_581_12
unknown

Not on your lists

12208..12672
DNA (465bp) protein (155aa)

This feature has no annotations

qs_4_scaffold_581_13
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12914..13276)
DNA (363bp) protein (121aa)
Uncharacterized protein n=8 Tax=Pseudomonas syringae pv. actinidiae RepID=S6KT32_PSESF
Uncharacterized protein {ECO:0000313|EMBL:EPN30412.1}; TaxID=1194405 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" sou
qs_4_scaffold_581_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13685..14935)
DNA (1251bp) protein (417aa)
Low temperature requirement A n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LVY1_9EURY
Low temperature requirement A {ECO:0000313|EMBL:EMA37616.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
hypothetical protein
qs_4_scaffold_581_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15190..15972)
DNA (783bp) protein (261aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
psmB; proteasome beta subunit (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4P9_9EURY
qs_4_scaffold_581_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15972..16718)
DNA (747bp) protein (249aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
psmA4; proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYM1_9EURY
qs_4_scaffold_581_17
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17083..18015
DNA (933bp) protein (311aa)
uvsE; UV damage endonuclease (EC:3.-.-.-)
UV-damage endonuclease n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y6V2_9ARCH
UV damage endonuclease UvdE {ECO:0000313|EMBL:ERH02852.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
qs_4_scaffold_581_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18107..20002)
DNA (1896bp) protein (632aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45331.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_581_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20351..20752)
DNA (402bp) protein (134aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXD9_9EURY
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:EMA38111.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
hypothetical protein
qs_4_scaffold_581_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20861..21895)
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK3_NATPD
radA; DNA repair and recombination protein RadA
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
qs_4_scaffold_581_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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22100..22831
DNA (732bp) protein (244aa)
DNA binding protein putative transcriptional regulator n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPH1_HALMO
DNA binding protein putative transcriptional regulator {ECO:0000313|EMBL:EMA47526.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
acrR; DNA binding protein putative transcriptional regulator
qs_4_scaffold_581_22
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22828..24111
DNA (1284bp) protein (428aa)
Putative MFS transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D2V6_9EURY
Putative MFS transporter {ECO:0000313|EMBL:ELZ29790.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
putative MFS transporter
qs_4_scaffold_581_trna_1
unknown

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24601..24717
DNA (117bp)
transferRNA
qs_4_scaffold_581_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24982..25443)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0N8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51522.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_4_scaffold_581_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25566..26648)
DNA (1083bp) protein (361aa)
glucose-fructose oxidoreductase (EC:1.1.99.28)
Xylose dehydrogenase (NAD/NADP) n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1T7_9EURY
Xylose dehydrogenase (NAD/NADP) {ECO:0000313|EMBL:EMA50660.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
qs_4_scaffold_581_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26812..27903
DNA (1092bp) protein (364aa)
TrmB family transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKP4_9EURY
TrmB family transcriptional regulator {ECO:0000313|EMBL:EMA44990.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
TrmB family transcriptional regulator
qs_4_scaffold_581_26
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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28005..28325
DNA (321bp) protein (107aa)
Sugar ABC transporter substrate binding protein n=2 Tax=Haloarcula hispanica RepID=G0HRY0_HALHT
sugar ABC transporter substrate-binding protein
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHB65949.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Hal
Displaying 27 items

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