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qs_4_scaffold_675

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_675_1
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..238
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V1W0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46492.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qs_4_scaffold_675_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(235..768)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NA61_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54771.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_675_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1808..1993
DNA (186bp) protein (62aa)
Chromosome segregation protein (Spc25, Csm1, Pcs1) n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N706_9EURY
Chromosome segregation protein (Spc25, Csm1, Pcs1) {ECO:0000313|EMBL:EMA53641.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
Kinetochore-Ndc80 complex, subunit Spc25
qs_4_scaffold_675_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2014..2553
DNA (540bp) protein (180aa)
Transposase ISH51 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVR9_9EURY
Transposase ISH51 {ECO:0000313|EMBL:EMA48500.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
transposase ISH51
qs_4_scaffold_675_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2531..2797
DNA (267bp) protein (89aa)
Transposase ISH51 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MS49_9EURY
Transposase ISH51 {ECO:0000313|EMBL:EMA48446.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 1355
transposase ISH3
qs_4_scaffold_675_6
unknown

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3483..3668
DNA (186bp) protein (62aa)

This feature has no annotations

qs_4_scaffold_675_7
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3683..4462)
DNA (780bp) protein (260aa)
IclR family transcriptional regulator n=1 Tax=Natrinema gari JCM 14663 RepID=L9Z5J5_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELY81644.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 1
IclR family transcriptional regulator
qs_4_scaffold_675_8
Geomicrobium sp. JCM 19038, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5293..6789
DNA (1497bp) protein (499aa)
Sodium:pantothenate symporter n=2 Tax=Geobacillus RepID=A4IK19_GEOTN
panF; sodium/panthothenate symporter
Pantothenate:Na+ symporter {ECO:0000313|EMBL:GAK07041.1}; TaxID=1460635 species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19038.;"
qs_4_scaffold_675_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6823..7923
DNA (1101bp) protein (367aa)
Luciferase-like, subgroup n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ37_PSEUX
luciferase-like protein
Luciferase-like, subgroup {ECO:0000313|EMBL:AEA24741.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
qs_4_scaffold_675_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7991..8923
DNA (933bp) protein (311aa)
Alpha/beta hydrolase fold-3 domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N973_9EURY
Alpha/beta hydrolase fold-3 domain-containing protein {ECO:0000313|EMBL:EMA53654.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
alpha/beta hydrolase fold protein
qs_4_scaffold_675_11
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9425..10207
DNA (783bp) protein (261aa)
Transcriptional regulator, IclR family n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1I0_HALTV
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADB63227.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena tu
qs_4_scaffold_675_12
Gordonia alkanivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10304..11395
DNA (1092bp) protein (364aa)
Monooxygenase LimB n=1 Tax=Gordonia alkanivorans NBRC 16433 RepID=F9VWS4_9ACTO
Monooxygenase LimB {ECO:0000313|EMBL:GAA13063.1}; TaxID=1027371 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia alkanivorans NBRC 16433.;"
luciferase-like protein
qs_4_scaffold_675_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11550..12263
DNA (714bp) protein (238aa)
ribK; CTP-dependent riboflavin kinase (EC:2.7.1.161)
Riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; Short=RFK {ECO:0000256|HAMAP-Rule:MF_01285};; EC=2.7.1.161 {ECO:0000256|HAMAP-Rule:MF_01285};; CTP-dependent riboflavin kinase {ECO:0000256|HAMAP-R
Riboflavin kinase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNQ1_NATM8
qs_4_scaffold_675_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12247..12930
DNA (684bp) protein (228aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=1085028 specie
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=halophilic archaeon J07HX64 RepID=U1P1V6_9EURY
3,4-dihydroxy-2-butanone 4-phosphate synthase
qs_4_scaffold_675_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12960..13481
DNA (522bp) protein (174aa)
Histidine triad (HIT) protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDF0_9EURY
Histidine triad (HIT) protein {ECO:0000313|EMBL:EMA55573.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
histidine triad (HIT) protein
qs_4_scaffold_675_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13534..15219
DNA (1686bp) protein (562aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI0003627961
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein
qs_4_scaffold_675_17
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15356..16183
DNA (828bp) protein (276aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S008_HALTV
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB62705.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena t
qs_4_scaffold_675_18
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16219..17535)
DNA (1317bp) protein (439aa)
cytochrome C oxidase subunit III n=1 Tax=Lactobacillus fructivorans RepID=UPI0002197129
purine-cytosine permease-like transporter
Tax=BJP_IG2157_Clostridiales_52_13
qs_4_scaffold_675_19
unknown

Not on your lists

comp(17645..17734)
DNA (90bp) protein (30aa)

This feature has no annotations

qs_4_scaffold_675_20
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18399..19268
DNA (870bp) protein (290aa)
NmrA family protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQP3_HALTV
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ADB60374.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain AT
qs_4_scaffold_675_21
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20127..20738
DNA (612bp) protein (204aa)
methylene-tetrahydromethanopterin reductase n=1 Tax=Streptomyces acidiscabies RepID=UPI0002887B7A
msuD; luciferase-like protein
Luciferase-like protein {ECO:0000313|EMBL:AIJ24707.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
qs_4_scaffold_675_22
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21214..21369
DNA (156bp) protein (52aa)
Phosphodiesterase/alkaline phosphatase D n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JKY2_NATP1
phosphodiesterase/alkaline phosphatase D
Phosphodiesterase/alkaline phosphatase D {ECO:0000313|EMBL:AGB31924.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source=
Displaying 22 items

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