ggKbase home page

qs_4_scaffold_775

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_775_1
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..699
DNA (699bp) protein (233aa)
Putative transcriptional regulator, AsnC family protein n=2 Tax=Natrinema RepID=I7BIZ2_NATSJ
putative transcriptional regulator, AsnC family protein
Putative transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ELY83188.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Na
qs_4_scaffold_775_2
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(891..1439)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=L9VGI7_HALVD
Uncharacterized protein {ECO:0000313|EMBL:ELY36161.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
hypothetical protein
qs_4_scaffold_775_3
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1843..2433
DNA (591bp) protein (197aa)
Transposase family protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AKH3_NATGS
transposase family protein
Transposase family protein {ECO:0000313|EMBL:AFZ73657.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY67850.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae
qs_4_scaffold_775_4
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2421..2636
DNA (216bp) protein (72aa)
Surface glycoprotein n=9 Tax=Haloarcula RepID=Q5V3T4_HALMA
cell surface protein
Surface glycoprotein {ECO:0000313|EMBL:EMA24551.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 1
qs_4_scaffold_775_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2702..2983
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYV6_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48645.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_775_6
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2984..3778)
DNA (795bp) protein (265aa)
ech2; enoyl-CoA hydratase (EC:4.2.1.17) rbh
Enoyl-CoA hydratase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KWG8_HALAR
Enoyl-CoA hydratase {ECO:0000313|EMBL:EMA24554.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12
qs_4_scaffold_775_7
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3862..5268
DNA (1407bp) protein (469aa)
phrB1; deoxyribodipyrimidine photolyase (EC:4.1.99.3)
Deoxyribodipyrimidine photolyase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K162_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:EMA13590.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiien
qs_4_scaffold_775_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5486..6097
DNA (612bp) protein (204aa)
sodA; superoxide dismutase (EC:1.15.1.1) rbh
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloa
Superoxide dismutase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J2E3_HALVA
qs_4_scaffold_775_9
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6348..6617
DNA (270bp) protein (90aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V330_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA12454.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
qs_4_scaffold_775_10
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6614..7432
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQX1_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA10394.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_4_scaffold_775_11
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7429..7869)
DNA (441bp) protein (147aa)
Uncharacterized conserved protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRY8_HALBP
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ADQ68034.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY24408.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
qs_4_scaffold_775_12
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8017..8592)
DNA (576bp) protein (192aa)
Beta-lactamase domain-containing protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JPT7_HALVA
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EMA10393.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
flavoprotein
qs_4_scaffold_775_13
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8777..9361
DNA (585bp) protein (195aa)
HoxA-like transcriptional regulator n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KTR9_HALAR
hlx1; HoxA-like transcriptional regulator
HoxA-like transcriptional regulator {ECO:0000313|EMBL:EMA24323.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula arge
qs_4_scaffold_775_14
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9376..10032
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JMZ4_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA10391.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_4_scaffold_775_15
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10077..10820
DNA (744bp) protein (248aa)
thyX; thymidylate synthase ThyX (EC:2.1.1.148) rbh
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
Thymidylate synthase ThyX n=2 Tax=Haloarcula hispanica RepID=G0HTB3_HALHT
qs_4_scaffold_775_16
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10912..12030
DNA (1119bp) protein (373aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRS3_HALBP
amino acid/amide ABC transporter membrane protein 1, haat family
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ADQ66860.1}; Amino acid/amide ABC transporter membrane protein 1, haat family {ECO:0000313|EMBL:ELY30368.1}; TaxID=46
qs_4_scaffold_775_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12027..13418
DNA (1392bp) protein (464aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DJE2_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ELZ34933.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source=
livM3; putative branched-chain amino acids ABC transporter permease
qs_4_scaffold_775_18
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13411..14241
DNA (831bp) protein (277aa)
ABC-type branched-chain amino acid transport system, ATP-binding protein I n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R8C6_HALMT
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
ABC-type branched-chain amino acid transport system, ATP-binding protein I {ECO:0000313|EMBL:ELZ98271.1}; ABC-type branched-chain amino acid transport systems, ATP-binding protein I {ECO:0000313|EMBL:
qs_4_scaffold_775_19
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14238..14999
DNA (762bp) protein (254aa)
ABC transporter n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HPA5_9EURY
livF3; putative branched-chain amino acids ABC transporter ATP-binding protein
ABC transporter {ECO:0000313|EMBL:ELZ54768.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-646.;"
qs_4_scaffold_775_20
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15005..16333)
DNA (1329bp) protein (443aa)
Branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein 1 n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J8V4_9EURY
Branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein 1 {ECO:0000313|EMBL:EMA04773.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacale
livJ3; putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein
qs_4_scaffold_775_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16530..19613
DNA (3084bp) protein (1028aa)
D-lactate dehydrogenase (EC:1.1.2.4)
Oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUD1_9EURY
Oxidoreductase {ECO:0000313|EMBL:ELZ25484.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
qs_4_scaffold_775_22
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19662..20780
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LD59_HALJP
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AJF27004.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_4_scaffold_775_trna_1
unknown

Not on your lists

20847..20921
DNA (75bp)
transferRNA
qs_4_scaffold_775_23
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21062..21247)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LAH4_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA30547.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_4_scaffold_775_24
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21314..22495)
DNA (1182bp) protein (394aa)
Glucose-1-phosphate thymidylyltransferase/Nucleotidyl transferase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KMU9_9EURY
Glucose-1-phosphate thymidylyltransferase/Nucleotidyl transferase {ECO:0000313|EMBL:EMA22712.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarc
glucose-1-phosphate thymidylyltransferase
qs_4_scaffold_775_25
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22637..23767
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZLB7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY85958.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
qs_4_scaffold_775_26
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23822..24592
DNA (771bp) protein (257aa)
Putative rep protein (DUF1424) {ECO:0000313|EMBL:ERH06340.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
Putative rep protein (DUF1424) id=24618733 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
qs_4_scaffold_775_27
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25093..25716
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K107_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB37783.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qs_4_scaffold_775_28
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25859..25987)
DNA (129bp) protein (43aa)
Phage integrase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JWL7_9EURY
Phage integrase {ECO:0000313|EMBL:EMA13552.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800.;"
phage integrase
qs_4_scaffold_775_29
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26083..26865)
DNA (783bp) protein (261aa)
Phage integrase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JWL7_9EURY
Phage integrase {ECO:0000313|EMBL:EMA13552.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800.;"
site-specific recombinase xerd
Displaying items 1-30 of 38 in total

View Taxonomy