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qs_4_scaffold_876

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_876_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..405)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L5M9_HALJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA28393.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
qs_4_scaffold_876_2
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(472..1665)
DNA (1194bp) protein (398aa)
D-mannose isomerase (EC:5.3.1.7) id=24625043 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
D-mannose isomerase (EC:5.3.1.7)
N-acyl-D-glucosamine 2-epimerase {ECO:0000313|EMBL:ERH00269.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J
qs_4_scaffold_876_3
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2314..2592)
DNA (279bp) protein (93aa)
Putative transposase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JLL4_9EURY
Putative transposase {ECO:0000313|EMBL:EMA10012.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 338
tnp; putative transposase
qs_4_scaffold_876_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2790..3779)
DNA (990bp) protein (330aa)
PfkB domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVT3_9EURY
PfkB domain-containing protein {ECO:0000313|EMBL:EMA48515.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
sugar kinase, ribokinase
qs_4_scaffold_876_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3864..4940)
DNA (1077bp) protein (359aa)
TrmB family transcriptional regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MSF3_9EURY
TrmB family transcriptional regulator {ECO:0000313|EMBL:EMA48516.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
archaeal sugar-specific transcriptional regulator, TrmB family
qs_4_scaffold_876_6
unknown

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comp(4943..5059)
DNA (117bp) protein (39aa)

This feature has no annotations

qs_4_scaffold_876_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5010..6143)
DNA (1134bp) protein (378aa)
Carbohydrate ABC transporter ATP-binding protein, cut1 family n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMY1_9EURY
Carbohydrate ABC transporter ATP-binding protein, cut1 family {ECO:0000313|EMBL:EMA46094.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
ugpC3; sugar ABC transporter ATP-binding protein
qs_4_scaffold_876_8
unknown

Not on your lists

comp(6192..6455)
DNA (264bp) protein (88aa)

This feature has no annotations

qs_4_scaffold_876_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6797..8158
DNA (1362bp) protein (454aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3JF35_9EURY
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EJN58876.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium
sugar ABC transporter substrate-binding protein
qs_4_scaffold_876_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8177..9118
DNA (942bp) protein (314aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRT0_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFW92699.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halad
carbohydrate ABC transporter membrane protein 1, cut1 family
qs_4_scaffold_876_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9115..10050
DNA (936bp) protein (312aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRT1_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFW92700.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halad
ugpE; ABC transporter permease
qs_4_scaffold_876_12
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10190..11569
DNA (1380bp) protein (460aa)
sulfatase id=24625030 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Arylsulfatase A related enzyme {ECO:0000313|EMBL:ERH00257.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07
sulfatase
qs_4_scaffold_876_13
unknown

Not on your lists

11928..12185
DNA (258bp) protein (86aa)

This feature has no annotations

qs_4_scaffold_876_14
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12378..12581)
DNA (204bp) protein (68aa)
Heavy metal transport/detoxification protein n=1 Tax=halophilic archaeon DL31 RepID=G2MKM7_9ARCH
heavy metal transport/detoxification protein
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CDA59111.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" sou
qs_4_scaffold_876_15
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12684..13229)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V797_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV44697.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qs_4_scaffold_876_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13358..15808
DNA (2451bp) protein (817aa)
Heavy metal translocating P-type ATPase (Fragment) n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJY5_9EURY
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EMA45992.1}; Flags: Fragment;; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" s
copA5; copper-transporting ATPase CopA
Displaying 16 items

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