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qs_4_scaffold_117

Search features with annotation key words

Displaying items 1-30 of 88 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_117_1
unknown

Not on your lists

comp(1..120)
DNA (120bp) protein (40aa)

This feature has no annotations

qs_4_scaffold_117_2
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(419..928)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LM43_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA33095.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qs_4_scaffold_117_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1017..1787)
DNA (771bp) protein (257aa)
Zinc/iron permease n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8Y1_HALXS
zinc/iron permease
Zinc/iron permease {ECO:0000313|EMBL:AEH37052.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323
qs_4_scaffold_117_4
unknown

Not on your lists

1945..2103
DNA (159bp) protein (53aa)

This feature has no annotations

qs_4_scaffold_117_5
unknown

Not on your lists

2145..2249
DNA (105bp) protein (35aa)

This feature has no annotations

qs_4_scaffold_117_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2252..3082)
DNA (831bp) protein (277aa)
Dolichol-P-glucose transferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKG1_9EURY
dolichol-P-glucose transferase
Dolichol-P-glucose transferase {ECO:0000313|EMBL:CCQ34799.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamate
qs_4_scaffold_117_7
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3278..4057
DNA (780bp) protein (260aa)
Molybdopterin binding domain protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LQ62_HALLT
molybdopterin binding domain protein
Molybdopterin binding domain protein {ECO:0000313|EMBL:ACM57500.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacuspro
qs_4_scaffold_117_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4094..5386)
DNA (1293bp) protein (431aa)
Peptidase M50 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNV1_9EURY
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ELZ29312.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
qs_4_scaffold_117_9
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5640..6074
DNA (435bp) protein (145aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D402_HALXS
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AEH36255.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduens
qs_4_scaffold_117_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6213..8252
DNA (2040bp) protein (680aa)
helicase (EC:3.6.1.-)
Archaea-specific helicase AshA {ECO:0000313|EMBL:CAI50663.1}; EC=3.6.4.- {ECO:0000313|EMBL:CAI50663.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Archaea-specific helicase AshA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMJ5_NATPD
qs_4_scaffold_117_11
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8286..8891)
DNA (606bp) protein (202aa)
HoxA-like transcriptional regulator n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YS06_9EURY
HoxA-like transcriptional regulator {ECO:0000313|EMBL:GAD51522.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1
hlx1; response regulator
qs_4_scaffold_117_12
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8888..9946)
DNA (1059bp) protein (353aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A9T3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD51523.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
qs_4_scaffold_117_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10035..10628)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CX86_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27851.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_117_14
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10729..11721)
DNA (993bp) protein (331aa)
Pyruvate formate-lyase activating-like protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1NT78_9EURY
Pyruvate formate-lyase activating-like protein {ECO:0000313|EMBL:ERH07130.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonoti
radical SAM domain-containing protein
qs_4_scaffold_117_15
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11821..12459)
DNA (639bp) protein (213aa)
YbhB YbcL family protein n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0S9T0_9EURY
YbhB YbcL family protein {ECO:0000313|EMBL:EJG07399.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Methanofollis li
hypothetical protein
qs_4_scaffold_117_16
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12554..13234
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W6B0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00263.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qs_4_scaffold_117_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13341..14438
DNA (1098bp) protein (366aa)
DUF373 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMI6_NATPD
hypothetical protein
DUF373 family protein {ECO:0000313|EMBL:CAI50672.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
qs_4_scaffold_117_18
unknown

Not on your lists

14545..14892
DNA (348bp) protein (116aa)

This feature has no annotations

qs_4_scaffold_117_19
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14923..15861)
DNA (939bp) protein (313aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EMA48388.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EMA48388.1};; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
ilvE_1; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSQ8_HALMO
qs_4_scaffold_117_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15993..16742
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCB2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55592.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_117_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16792..17463)
DNA (672bp) protein (224aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=485914 species
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P209_HALMD
3,4-dihydroxy-2-butanone 4-phosphate synthase rbh
qs_4_scaffold_117_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17450..18145)
DNA (696bp) protein (232aa)
Riboflavin kinase; Short=RFK;; EC=2.7.1.161;; CTP-dependent riboflavin kinase; CTP:riboflavin 5'-phosphotransferase; Flavokinase; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
Riboflavin kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RIFK_NATPD
rib operon protein
qs_4_scaffold_117_23
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


18325..20076
DNA (1752bp) protein (584aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123, ECO:0000313|EMBL:ELY53641.1};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WWT1_9EURY
qs_4_scaffold_117_24
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20304..21290)
DNA (987bp) protein (329aa)
Septum site-determining protein MinD n=2 Tax=Haloarcula RepID=Q5UXY1_HALMA
minD3; septum site-determining protein MinD
Septum site-determining protein MinD {ECO:0000313|EMBL:EMA17689.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula cali
qs_4_scaffold_117_25
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21433..22680
DNA (1248bp) protein (416aa)
Peptide chain release factor subunit 1 n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CG05_9EURY
Peptide chain release factor subunit 1 {ECO:0000256|HAMAP-Rule:MF_00424}; Translation termination factor aRF1 {ECO:0000256|HAMAP-Rule:MF_00424}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobact
peptide chain release factor eRF/aRF subunit 1
qs_4_scaffold_117_26
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22852..23889)
DNA (1038bp) protein (346aa)
farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21)
Farnesyl-diphosphate farnesyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CUI7_9EURY
Farnesyl-diphosphate farnesyltransferase {ECO:0000313|EMBL:ELZ26313.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeome
qs_4_scaffold_117_27
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24025..24414)
DNA (390bp) protein (130aa)
Ferredoxin n=1 Tax=Halorubrum sp. AJ67 RepID=V6E023_9EURY
Ferredoxin {ECO:0000313|EMBL:KDS91081.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
ferredoxin
qs_4_scaffold_117_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24475..24720)
DNA (246bp) protein (82aa)
Phosphate permease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D018_9EURY
Phosphate permease {ECO:0000313|EMBL:ELZ28810.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
anion permease
qs_4_scaffold_117_29
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24769..25617)
DNA (849bp) protein (283aa)
Probable low-affinity inorganic phosphate transporter n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YSK9_9EURY
Probable low-affinity inorganic phosphate transporter {ECO:0000313|EMBL:GAD51990.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchae
anion permease
qs_4_scaffold_117_30
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25750..26958)
DNA (1209bp) protein (403aa)
Anion permease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZY5_9EURY
Anion permease {ECO:0000313|EMBL:ELZ28811.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
phosphate transporter
Displaying items 1-30 of 88 in total

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