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qs_4_scaffold_1975

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1975_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..517)
DNA (516bp) protein (172aa)
Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2T5_9EURY
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:ELZ29153.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="H
pyruvate dehydrogenase E1 component, alpha subunit
qs_4_scaffold_1975_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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702..1298
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JA21_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14543.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_4_scaffold_1975_3
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1479..1916
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IC46_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB15542.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
qs_4_scaffold_1975_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1958..2926)
DNA (969bp) protein (323aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
Probable lipoyl synthase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZB8_HALMD
lipoyl synthase
qs_4_scaffold_1975_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2987..4414
DNA (1428bp) protein (476aa)
MATE efflux family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXG1_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA49993.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps
qs_4_scaffold_1975_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4451..6799
DNA (2349bp) protein (783aa)
Pre-mRNA splicing helicase protein {ECO:0000313|EMBL:ERJ07530.1}; EC=3.6.4.13 {ECO:0000313|EMBL:ERJ07530.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
DEAD/DEAH box helicase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PK01_9EURY
DEAD/DEAH box helicase
qs_4_scaffold_1975_7
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6922..7662
DNA (741bp) protein (247aa)
Topoisomerase DNA binding C4 zinc finger {ECO:0000313|EMBL:AEM55856.1}; EC=5.99.1.2 {ECO:0000313|EMBL:AEM55856.1};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
Topoisomerase DNA binding C4 zinc finger n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KZK8_9EURY
DNA topoisomerase I
qs_4_scaffold_1975_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7783..8856
DNA (1074bp) protein (358aa)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=797114 species="Archaea;
tRNA splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2U7_9EURY
qs_4_scaffold_1975_9
unknown

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9010..9090
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 9 items

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