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qs_4_scaffold_2391

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_2391_1
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(59..349)
DNA (291bp) protein (97aa)
Glucan 14-alpha-glucosidase {ECO:0000313|EMBL:ELZ34268.1}; Flags: Fragment;; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
qs_4_scaffold_2391_2
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1248..2633
DNA (1386bp) protein (462aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KCB4_HALAR
qs_4_scaffold_2391_3
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2764..3486
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V1L9_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46583.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qs_4_scaffold_2391_4
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3544..4164
DNA (621bp) protein (207aa)
Radical SAM domain protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZ44_HALTV
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ADB59968.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (st
qs_4_scaffold_2391_5
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4270..4866
DNA (597bp) protein (199aa)
50S ribosomal protein L37 n=1 Tax=Halomicrobium katesii RepID=UPI0003791AA8
50S ribosomal protein L37
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
qs_4_scaffold_2391_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4897..5031
DNA (135bp) protein (45aa)
rpoP; DNA-directed RNA polymerase subunit P (EC:2.7.7.6)
DNA-directed RNA polymerase subunit P {ECO:0000255|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00615};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit P n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RPOP_NATPD
qs_4_scaffold_2391_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5033..5362
DNA (330bp) protein (110aa)
Rpo operon protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVP8_HALMD
rpo operon protein
Rpo operon protein {ECO:0000313|EMBL:ACV46163.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (stra
qs_4_scaffold_2391_8
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5467..5871
DNA (405bp) protein (135aa)
Prefoldin subunit beta n=8 Tax=Haloarcula RepID=PFDB_HALMA
pfdB; prefoldin beta subunit
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
qs_4_scaffold_2391_9
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5878..6150
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LDB6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA31571.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qs_4_scaffold_2391_10
unknown

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comp(6304..6399)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 10 items

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