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qs_4_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_250_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..1731)
DNA (1731bp) protein (577aa)
dihydrofolate synthase / folylpoly glutamate synthase / alternative dihydrofolate reductase 2 / dihydropteroate synthase (EC:2.5.1.15 6.3.2.12 6.3.2.17)
Dihydrofolate synthase / folylpoly glutamate synthase / alternative dihydrofolate reductase 2 / dihydropteroate synthase {ECO:0000313|EMBL:CCQ32497.1}; EC=2.5.1.15 {ECO:0000313|EMBL:CCQ32497.1};; EC=6
Dihydrofolate synthase / folylpoly glutamate synthase / alternative dihydrofolate reductase 2 / dihydropteroate synthase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PH80_9EURY
qs_4_scaffold_250_2
unknown

Not on your lists

comp(1771..2373)
DNA (603bp) protein (201aa)

This feature has no annotations

qs_4_scaffold_250_3
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2632..4230)
DNA (1599bp) protein (533aa)
purH; bifunctional purine biosynthesis protein PurH (EC:2.1.2.2)
Bifunctional purine biosynthesis protein PurH {ECO:0000313|EMBL:AFK18809.1}; EC=2.1.2.2 {ECO:0000313|EMBL:AFK18809.1};; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
Bifunctional purine biosynthesis protein PurH n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R3J9_HALMT
qs_4_scaffold_250_4
unknown

Not on your lists

comp(4378..4803)
DNA (426bp) protein (142aa)

This feature has no annotations

qs_4_scaffold_250_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4889..6253
DNA (1365bp) protein (455aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK10_9EURY
qs_4_scaffold_250_6
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6290..6904
DNA (615bp) protein (205aa)
Phosphoribosyltransferase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J563_HALJB
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ADJ13644.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotg
qs_4_scaffold_250_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7204..8286)
DNA (1083bp) protein (361aa)
Peptidase M20 n=1 Tax=Halobacterium sp. DL1 RepID=G4IHP4_9EURY
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:AHG03236.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacter
succinyl-diaminopimelate desuccinylase
qs_4_scaffold_250_8
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8289..9134)
DNA (846bp) protein (282aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000313|EMBL:ELZ92043.1}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1
dapF; diaminopimelate epimerase (EC:5.1.1.7) rbh
Diaminopimelate epimerase n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0I880_9EURY
qs_4_scaffold_250_9
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9131..10363)
DNA (1233bp) protein (411aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0IWR4_9EURY
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
qs_4_scaffold_250_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10360..11193)
DNA (834bp) protein (278aa)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase {ECO:0000313|EMBL:EMA44961.1}; EC=2.3.1.117 {ECO:0000313|EMBL:EMA44961.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGX1_9EURY
qs_4_scaffold_250_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11190..11948)
DNA (759bp) protein (253aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102};; TaxID=1227487 spe
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CW74_9EURY
dihydrodipicolinate reductase
qs_4_scaffold_250_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11945..12859)
DNA (915bp) protein (305aa)
dapA; 4-hydroxy-tetrahydrodipicolinate synthase (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=268739 species
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS38_NATM8
qs_4_scaffold_250_13
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13246..13500
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XIP1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY61609.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qs_4_scaffold_250_14
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13608..14105
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EKM4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ48300.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
qs_4_scaffold_250_15

Not on your lists

14207..14677
DNA (471bp) protein (157aa)
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y232_9ARCH
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit {ECO:0000313|EMBL:ESS08748.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon
pfdA; prefoldin subunit alpha
qs_4_scaffold_250_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14796..15230
DNA (435bp) protein (145aa)
nascent polypeptide associated complex nac; K03626 nascent polypeptide-associated complex subunit alpha id=24616006 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;
nascent polypeptide associated complex nac
qs_4_scaffold_250_17
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15227..15949
DNA (723bp) protein (241aa)
Methyltransferase type 12 n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PEA6_9EURY
Methyltransferase type 12 {ECO:0000313|EMBL:EMA68213.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 135
methyltransferase type 12
qs_4_scaffold_250_18
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16022..16255
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LUH9_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM56336.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qs_4_scaffold_250_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16252..16584
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTL0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49047.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_4_scaffold_250_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16605..17207)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M221_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38634.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_4_scaffold_250_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17344..17664)
DNA (321bp) protein (107aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
DNA-directed RNA polymerase subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZV7_9EURY
transcription termination factor Tfs
qs_4_scaffold_250_22
Haloferax sp. ATCC BAA-644, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18088..19089
DNA (1002bp) protein (334aa)
Proteinase IV-like protein n=3 Tax=Haloferax RepID=M0FG84_9EURY
Proteinase IV-like protein {ECO:0000313|EMBL:ELZ69385.1}; TaxID=1227462 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-644.;"
signal peptide peptidase SppA, 36K type
qs_4_scaffold_250_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19122..20261
DNA (1140bp) protein (380aa)
DUF373 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUA0_NATPD
hypothetical protein
DUF373 family protein {ECO:0000313|EMBL:CAI48281.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
qs_4_scaffold_250_24
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20330..21088
DNA (759bp) protein (253aa)
ATP binding protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7C1N2_NATSJ
ATP binding protein
ATP binding protein {ECO:0000313|EMBL:AFO59310.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
qs_4_scaffold_250_25
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21218..21424
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JYS8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB37259.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qs_4_scaffold_250_26
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21649..22746)
DNA (1098bp) protein (366aa)
Nucleotidyl transferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0X6_HALMD
nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:ACV48991.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_250_27
unknown

Not on your lists

comp(22753..22995)
DNA (243bp) protein (81aa)

This feature has no annotations

qs_4_scaffold_250_28
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23006..23422)
DNA (417bp) protein (139aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Halogranum salarium B-1 RepID=J3EYS4_9EURY
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:EJN60587.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
qs_4_scaffold_250_29
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23558..23980
DNA (423bp) protein (141aa)
Thioesterase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K2C9_9EURY
Thioesterase {ECO:0000313|EMBL:EMA15577.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800.;"
thioesterase
qs_4_scaffold_250_30
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24075..25265
DNA (1191bp) protein (397aa)
Saccharopine dehydrogenase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDL6_9EURY
Saccharopine dehydrogenase {ECO:0000313|EMBL:AHG04894.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.
hypothetical protein
Displaying items 1-30 of 42 in total

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