ggKbase home page

qs_4_scaffold_323

Search features with annotation key words

Displaying items 1-30 of 62 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_323_1
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

342..1016
DNA (675bp) protein (225aa)
Glycosyl transferase family 39 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQZ0_HALTV
glycosyl transferase family protein
Glycosyl transferase family 39 {ECO:0000313|EMBL:ADB62386.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica
qs_4_scaffold_323_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1107..2189
DNA (1083bp) protein (361aa)
NADPH dehydrogenase (OLD yellow enzyme); 2,4-dienoyl-CoA reductase (NADPH) (EC:1.3.1.34 1.6.99.1)
NADH-dependent flavin oxidoreductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKS9_9EURY
NADH-dependent flavin oxidoreductase {ECO:0000313|EMBL:EMA45020.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
qs_4_scaffold_323_3
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2274..2612)
DNA (339bp) protein (113aa)
peptidyl-tRNA hydrolase, PTH2 family (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00628}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00628};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00628};; TaxID=523841 species="Archaea; Euryarchaeota; H
Peptidyl-tRNA hydrolase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R293_HALMT
qs_4_scaffold_323_4
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2717..3304
DNA (588bp) protein (196aa)
Probable deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1230457
Probable deoxycytidine triphosphate deaminase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C686_9EURY
deoxycytidine triphosphate deaminase
qs_4_scaffold_323_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3465..4361
DNA (897bp) protein (299aa)
Transcriptional regulator, XRE family n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVQ8_HALMD
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACV46173.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobi
qs_4_scaffold_323_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4358..5032
DNA (675bp) protein (225aa)
S-adenosylmethionine-dependent methyltransferase 3 (EC:2.1.1.-)
Probable S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:CAI50676.1}; EC=2.1.1.- {ECO:0000313|EMBL:CAI50676.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobact
Probable S-adenosylmethionine-dependent methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMI2_NATPD
qs_4_scaffold_323_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5252..6145
DNA (894bp) protein (298aa)
Membrane lipoprotein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PH78_9EURY
hypothetical protein
Membrane lipoprotein {ECO:0000313|EMBL:ERJ05618.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ32495.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
qs_4_scaffold_323_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6142..7371
DNA (1230bp) protein (410aa)
Membrane lipoprotein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PH79_9EURY
hypothetical protein
Membrane lipoprotein {ECO:0000313|EMBL:ERJ05617.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ32496.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
qs_4_scaffold_323_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7423..8040)
DNA (618bp) protein (206aa)
Probable GTP-binding protein EngB n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQ70_9EURY
engB; GTP-binding protein EngB
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
qs_4_scaffold_323_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8558..9700
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQ81_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24542.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_323_11
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9643..9822
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P463_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA64927.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
qs_4_scaffold_323_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9913..10182)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPB2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46305.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qs_4_scaffold_323_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10294..11013
DNA (720bp) protein (240aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] id=24614295 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:ESP89212.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Can
5-formyltetrahydrofolate cyclo-ligase
qs_4_scaffold_323_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11225..12997
DNA (1773bp) protein (591aa)
Formate/nitrite transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB91_9EURY
Formate/nitrite transporter {ECO:0000313|EMBL:EMA55116.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
formate/nitrite transporter family protein rbh
qs_4_scaffold_323_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13090..14376
DNA (1287bp) protein (429aa)
DUF389 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU03_NATPD
hypothetical protein
DUF389 family protein {ECO:0000313|EMBL:CAI48380.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
qs_4_scaffold_323_16
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14485..15228
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LS00_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM57874.1}; Flags: Precursor;; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum la
qs_4_scaffold_323_17
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15358..15798
DNA (441bp) protein (147aa)
Putative permease n=1 Tax=Natronococcus occultus SP4 RepID=L0K4G0_9EURY
putative permease
Putative permease {ECO:0000313|EMBL:AGB39254.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qs_4_scaffold_323_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15953..16942)
DNA (990bp) protein (330aa)
Probable GTP-binding protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU00_NATPD
GTP-binding protein
Probable GTP-binding protein {ECO:0000313|EMBL:CAI48383.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qs_4_scaffold_323_19
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17080..17439
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8W5_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH38034.1}; Flags: Precursor;; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanadu
qs_4_scaffold_323_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17535..17849
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY71_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26839.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_323_21
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17901..18281)
DNA (381bp) protein (127aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020};; TaxID=1417673 species="Archaea; E
Phosphoribosyl-ATP pyrophosphatase n=2 Tax=Haloarcula hispanica RepID=G0HS52_HALHT
phosphoribosyl-ATP pyrophosphatase
qs_4_scaffold_323_22
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18274..18738)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W6A4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY44984.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
hypothetical protein
qs_4_scaffold_323_23
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18827..19456)
DNA (630bp) protein (210aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase g
Glutamine amidotransferase subunit PdxT n=1 Tax=Halobacterium sp. DL1 RepID=G4IAV2_9EURY
hisH1; glutamine amidotransferase subunit PdxT
qs_4_scaffold_323_24
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19510..19668)
DNA (159bp) protein (53aa)
secG; preprotein translocase subunit SecG id=24627750 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Preprotein translocase subunit SecG {ECO:0000256|HAMAP-Rule:MF_00751}; Protein transport protein Sec61 subunit beta homolog {ECO:0000256|HAMAP-Rule:MF_00751}; TaxID=1238424 species="Archaea; Euryarcha
secG; protein translocase subunit SecG
qs_4_scaffold_323_25
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19847..20116
DNA (270bp) protein (90aa)
Thioredoxin n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XH77_9EURY
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ELY76866.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
qs_4_scaffold_323_26
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20260..20925)
DNA (666bp) protein (222aa)
F420-dependent NADP reductase (EC:1.-.-.-)
Reduced coenzyme f420:NADp oxidoreductase n=1 Tax=Halogranum salarium B-1 RepID=J3JFT1_9EURY
Reduced coenzyme f420:NADp oxidoreductase {ECO:0000313|EMBL:EJN59524.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;
qs_4_scaffold_323_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21006..21653)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2D1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29595.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
HAD superfamily (subfamily IA) hydrolase, TIGR01548
qs_4_scaffold_323_28
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21828..22256)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI0003743148
hypothetical protein
UPF0146 protein C497_08609 {ECO:0000256|HAMAP-Rule:MF_00341}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus
qs_4_scaffold_323_29
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22407..22928
DNA (522bp) protein (174aa)
amzA; archaemetzincin (EC:3.4.-.-)
Archaemetzincin {ECO:0000256|HAMAP-Rule:MF_01842}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_01842};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Archaemetzincin n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMY4_NATM8
qs_4_scaffold_323_30
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23170..23943)
DNA (774bp) protein (258aa)
Histidinol phosphate phosphatase HisJ family protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EHX4_9EURY
Histidinol phosphate phosphatase HisJ family protein {ECO:0000313|EMBL:ELZ45989.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
histidinol phosphate phosphatase HisJ family
Displaying items 1-30 of 62 in total

View Taxonomy