ggKbase home page

qs_4_scaffold_1132

Search features with annotation key words

Displaying items 1-30 of 40 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1132_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

355..2430
DNA (2076bp) protein (692aa)
GTP-binding protein Era n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITZ5_NATPD
GTP-binding protein
Origin-associated GTP-binding protein OapA {ECO:0000313|EMBL:CAI48388.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
qs_4_scaffold_1132_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2435..2842
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITZ6_NATPD
hypothetical protein
Origin-associated protein OapB {ECO:0000313|EMBL:CAI48387.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
qs_4_scaffold_1132_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2908..3840
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITZ7_NATPD
hypothetical protein
Origin-associated protein OapC {ECO:0000313|EMBL:CAI48386.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
qs_4_scaffold_1132_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4119..5633
DNA (1515bp) protein (505aa)
MATE efflux family protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZD1_HALMD
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ACV46817.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohata
qs_4_scaffold_1132_5
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6174..6440
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ83957.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
qs_4_scaffold_1132_6
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6452..6715
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Haloferax RepID=M0FD39_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ57936.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-646.;"
hypothetical protein
qs_4_scaffold_1132_7
unknown

Not on your lists

6860..6955
DNA (96bp) protein (32aa)

This feature has no annotations

qs_4_scaffold_1132_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6957..7772
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBV8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55038.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_1132_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7819..8094)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PL73_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ05828.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qs_4_scaffold_1132_10

Not on your lists

comp(8283..9236)
DNA (954bp) protein (318aa)
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domain protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZV81_9ARCH
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domain protein {ECO:0000313|EMBL:ESS06775.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncult
GAF domain-containing protein
qs_4_scaffold_1132_11
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9437..10468
DNA (1032bp) protein (344aa)
Replication factor C small subunit 2 n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CHW8_9EURY
Replication factor C small subunit 2 {ECO:0000313|EMBL:ELZ21952.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena sal
Replication factor C
qs_4_scaffold_1132_12
unknown

Not on your lists

comp(10767..11552)
DNA (786bp) protein (262aa)

This feature has no annotations

qs_4_scaffold_1132_13
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11618..12847)
DNA (1230bp) protein (410aa)
Putative RNA methylase family UPF0020 n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I8L9_HALRX
Putative RNA methylase family UPF0020
Putative RNA methylase family UPF0020 {ECO:0000313|EMBL:AGB15158.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (stra
qs_4_scaffold_1132_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13023..13586
DNA (564bp) protein (188aa)
TATA-box-binding protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK64_NATM8
tbpE; transcription factor
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E
qs_4_scaffold_1132_15
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13660..14097
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KX11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA25811.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
qs_4_scaffold_1132_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14200..14622)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJX4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ07503.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qs_4_scaffold_1132_17
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14739..16511
DNA (1773bp) protein (591aa)
UvrABC system protein C n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSV7_HALBP
excinuclease ABC subunit c
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=469382 species="Ar
qs_4_scaffold_1132_18
unknown

Not on your lists

comp(17058..17429)
DNA (372bp) protein (124aa)

This feature has no annotations

qs_4_scaffold_1132_19
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18386..18616
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VM67_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY38249.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
qs_4_scaffold_1132_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18613..19017
DNA (405bp) protein (135aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY46_9EURY
PilT protein domain-containing protein
qs_4_scaffold_1132_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19311..20633
DNA (1323bp) protein (441aa)
Stomatin family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMX7_NATM8
stomatin family protein
Stomatin family protein {ECO:0000313|EMBL:CCQ35235.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_4_scaffold_1132_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20702..21511
DNA (810bp) protein (270aa)
pheA; prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase {ECO:0000313|EMBL:CCQ37959.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CCQ37959.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Prephenate dehydratase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTY1_NATM8
qs_4_scaffold_1132_23
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21903..22616
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F524_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ55005.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
qs_4_scaffold_1132_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22830..23822
DNA (993bp) protein (331aa)
Twin arginine translocation system subunit TatC n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISW9_NATPD
tatC; twin-arginine translocation protein TatC
Sec-independent protein translocase subunit TatC {ECO:0000313|EMBL:CAI48766.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="N
qs_4_scaffold_1132_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23780..25093
DNA (1314bp) protein (438aa)
Twin arginine translocation system subunit TatC n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISW9_NATPD
tatC_2; sec-independent protein translocase component TatC 2
Sec-independent protein translocase subunit TatC {ECO:0000313|EMBL:CAI48766.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="N
qs_4_scaffold_1132_26
unknown

Not on your lists

comp(25267..25494)
DNA (228bp) protein (76aa)

This feature has no annotations

qs_4_scaffold_1132_27
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25516..26328)
DNA (813bp) protein (271aa)
Formate/nitrite transporter n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H7M1_9EURY
Formate/nitrite transporter {ECO:0000313|EMBL:ELZ80506.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917
formate/nitrite transporter
qs_4_scaffold_1132_28
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26859..27041
DNA (183bp) protein (61aa)
CopG family protein n=2 Tax=Halobacterium salinarum RepID=B0R7G5_HALS3
hypothetical protein
CopG domain protein {ECO:0000313|EMBL:CAP14684.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (stra
qs_4_scaffold_1132_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27056..27868)
DNA (813bp) protein (271aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SNS8_9EURY
ribosomal RNA methyltransferase RrmJ/FtsJ
qs_4_scaffold_1132_30
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27958..28263
DNA (306bp) protein (102aa)
PAS domain S-box n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JP88_NATP1
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:AGB32407.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 15624 /
Displaying items 1-30 of 40 in total

View Taxonomy