ggKbase home page

qs_4_scaffold_341

Search features with annotation key words

Displaying items 1-30 of 44 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_341_1
unknown

Not on your lists

3..110
DNA (108bp) protein (36aa)

This feature has no annotations

qs_4_scaffold_341_2
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

172..1506
DNA (1335bp) protein (445aa)
hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
Hydroxymethylglutaryl-CoA synthase n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AHE1_9EURY
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:ELY97322.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensi
qs_4_scaffold_341_3
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1594..2307)
DNA (714bp) protein (238aa)
Putative transcriptional regulator n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YSP2_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:GAD51757.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-
hypothetical protein
qs_4_scaffold_341_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2815..3975)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037EB3AB
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ACV48896.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Ha
qs_4_scaffold_341_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4037..5101
DNA (1065bp) protein (355aa)
ABC-type vitamin B12 transporter, permease component BtuC n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFG2_9EURY
btuC; ABC-type vitamin B12 transporter, permease component BtuC
ABC-type vitamin B12 transporter, permease component BtuC {ECO:0000313|EMBL:CCQ34377.1}; Cobalamin import system permease protein BtuC {ECO:0000313|EMBL:ERJ06063.1}; TaxID=1033806 species="Archaea; Eu
qs_4_scaffold_341_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5098..6072
DNA (975bp) protein (325aa)
ABC-type transport system ATP-binding protein (Probable substrate cobalamin) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSA5_NATM8
btuD; ABC-type transport system ATP-binding protein (probable substrate cobalamin)
ABC-type transport system ATP-binding protein (Probable substrate cobalamin) {ECO:0000313|EMBL:CCQ37233.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
qs_4_scaffold_341_7
unknown

Not on your lists

comp(6073..6351)
DNA (279bp) protein (93aa)

This feature has no annotations

qs_4_scaffold_341_8
unknown

Not on your lists

6439..7197
DNA (759bp) protein (253aa)

This feature has no annotations

qs_4_scaffold_341_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7355..7615
DNA (261bp) protein (87aa)
Homolog to phage PhiH1 repressor protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) PF0_NATPD">RepID=Q3IPF0_NATPD
hypothetical protein
Homolog to phage PhiH1 repressor protein {ECO:0000313|EMBL:CAI50001.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomo
qs_4_scaffold_341_10
unknown

Not on your lists

7648..7740
DNA (93bp) protein (31aa)

This feature has no annotations

qs_4_scaffold_341_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7796..8017
DNA (222bp) protein (74aa)
Hypotheical protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A1Y6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36420.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_4_scaffold_341_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8001..8687)
DNA (687bp) protein (229aa)
HAD superfamily hydrolase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKB7_NATM8
HAD superfamily hydrolase
HAD superfamily hydrolase {ECO:0000313|EMBL:CCQ35606.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
qs_4_scaffold_341_13
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8790..9122)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LQM1_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM57642.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qs_4_scaffold_341_14
unknown

Not on your lists

comp(9123..9227)
DNA (105bp) protein (35aa)

This feature has no annotations

qs_4_scaffold_341_15
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9227..9589)
DNA (363bp) protein (121aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IW51_9EURY
phhB; pterin-4-alpha-carbinolamine dehydratase
qs_4_scaffold_341_16
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9668..10525)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NPB3_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY31187.1}; Uncharacterized protein required for cytochrome oxidase assembly {ECO:0000313|EMBL:ADQ66468.1}; Flags: Precursor;; TaxID=469382 species="Archaea;
qs_4_scaffold_341_17
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10747..11481)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W4U0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY44362.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
SCP-like extracellular
qs_4_scaffold_341_18
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12632..12877
DNA (246bp) protein (82aa)
hypothetical protein id=24641053 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Uncharacterized protein {ECO:0000313|EMBL:ERH13912.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
qs_4_scaffold_341_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12874..13269
DNA (396bp) protein (132aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIH5_9EURY
PilT protein domain-containing protein
qs_4_scaffold_341_20
unknown

Not on your lists

comp(13645..13821)
DNA (177bp) protein (59aa)

This feature has no annotations

qs_4_scaffold_341_21
unknown

Not on your lists

comp(13814..14314)
DNA (501bp) protein (167aa)

This feature has no annotations

qs_4_scaffold_341_22
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14367..15596)
DNA (1230bp) protein (410aa)
IS1341-type transposase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JU29_NATP1
transposase, IS605 OrfB family, central region
IS1341-type transposase {ECO:0000313|EMBL:ELY69382.1}; Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:AGB33891.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrial
qs_4_scaffold_341_23
unknown

Not on your lists

comp(15636..16085)
DNA (450bp) protein (150aa)

This feature has no annotations

qs_4_scaffold_341_24
unknown

Not on your lists

comp(16066..16251)
DNA (186bp) protein (62aa)

This feature has no annotations

qs_4_scaffold_341_25
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16439..17071)
DNA (633bp) protein (211aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:M
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W986_9EURY
protein-L-isoaspartate O-methyltransferase
qs_4_scaffold_341_26
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17078..17737)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W6R1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02472.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qs_4_scaffold_341_27
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17804..19105)
DNA (1302bp) protein (434aa)
Major facilitator family hexuronate transporter n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JKI2_9EURY
L-galactonate transporter {ECO:0000313|EMBL:CQR48926.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
tp14; major facilitator family hexuronate transporter
qs_4_scaffold_341_28
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19369..21348
DNA (1980bp) protein (660aa)
Aconitate hydratase {ECO:0000313|EMBL:ADJ16027.1}; EC=4.2.1.3 {ECO:0000313|EMBL:ADJ16027.1};; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalico
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7K7_HALJB
qs_4_scaffold_341_29
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21485..22324)
DNA (840bp) protein (280aa)
Heat shock protein DnaJ domain protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BX99_9EURY
Heat shock protein DnaJ domain protein {ECO:0000313|EMBL:ELZ15656.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena t
heat shock protein DnaJ domain protein
qs_4_scaffold_341_30
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22752..23213
DNA (462bp) protein (154aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N9G5_9EURY
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EMA53754.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
ribosomal-protein-alanine acetyltransferase
Displaying items 1-30 of 44 in total

View Taxonomy