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qs_4_scaffold_1012

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1012_1
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(111..614)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H711_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ80331.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
qs_4_scaffold_1012_2

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comp(618..2090)
DNA (1473bp) protein (491aa)
sulfite oxidase (EC:1.8.3.1)
Sulfite oxidase {ECO:0000313|EMBL:AEN04789.1}; EC=1.8.3.1 {ECO:0000313|EMBL:AEN04789.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Sulfite oxidase n=1 Tax=halophilic archaeon DL31 RepID=G2MIK8_9ARCH
qs_4_scaffold_1012_3
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2247..2720
DNA (474bp) protein (158aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LP73_9EURY
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisal
FKBP-type peptidyl-prolyl cis-trans isomerase
qs_4_scaffold_1012_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2853..3962
DNA (1110bp) protein (370aa)
mic; mechanosensitive ion channel MscS id=24649121 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:ERH11244.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
mic; mechanosensitive ion channel MscS
qs_4_scaffold_1012_5
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4015..4290
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IA83_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB15644.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
qs_4_scaffold_1012_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4287..4718
DNA (432bp) protein (144aa)
Homolog to endonuclease VapC n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LMA5_HALWC
homolog to endonuclease VapC
Homolog to endonuclease VapC {ECO:0000313|EMBL:CCC41225.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (s
qs_4_scaffold_1012_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4843..5253)
DNA (411bp) protein (137aa)
CBS domain containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNZ9_9EURY
CBS domain containing protein {ECO:0000313|EMBL:ELZ23584.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
signal transduction protein with CBS domains
qs_4_scaffold_1012_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5372..6352
DNA (981bp) protein (327aa)
3-isopropylmalate dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMJ2_9EURY
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:ELZ23607.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
3-isopropylmalate dehydrogenase
qs_4_scaffold_1012_9
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6469..6873
DNA (405bp) protein (135aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W1F0_9EURY
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AGN02426.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salin
qs_4_scaffold_1012_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6816..8309
DNA (1494bp) protein (498aa)
acyl-CoA dehydrogenase id=24645715 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ERH09934.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
acyl-CoA dehydrogenase
qs_4_scaffold_1012_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8334..8993
DNA (660bp) protein (220aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeo
phosphodiesterase, MJ0936 family id=24647890 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
putative phosphoesterase
qs_4_scaffold_1012_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9215..10396)
DNA (1182bp) protein (394aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=halophilic archaeon J07HX64 RepID=U1NXW9_9EURY
qs_4_scaffold_1012_13
unknown

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comp(10454..10993)
DNA (540bp) protein (180aa)

This feature has no annotations

qs_4_scaffold_1012_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11096..16783)
DNA (5688bp) protein (1896aa)
DNA polymerase II large subunit {ECO:0000313|EMBL:ELZ29504.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ELZ29504.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA polymerase II, large subunit DP2 (EC:2.7.7.7)
DNA polymerase II large subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D5U7_9EURY
qs_4_scaffold_1012_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16785..17207)
DNA (423bp) protein (141aa)
Putative PD1-like DNA-binding protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1NZC6_9EURY
Putative PD1-like DNA-binding protein {ECO:0000313|EMBL:ERH09620.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
polA operon protein ( DNA-binding protein)
qs_4_scaffold_1012_16
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17329..19626)
DNA (2298bp) protein (766aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
Polyphosphate kinase n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BSJ6_9EURY
polyphosphate kinase 1
qs_4_scaffold_1012_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(19623..20381)
DNA (759bp) protein (253aa)
pphA; serine/threonine protein phosphatase (EC:3.1.3.16)
Serine/threonine protein phosphatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTB4_9EURY
Serine/threonine protein phosphatase {ECO:0000313|EMBL:EFW91843.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
qs_4_scaffold_1012_18

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comp(20627..20836)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y9E4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS09431.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
Displaying 18 items

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