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qs_4_scaffold_1780

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1780_1
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(47..271)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LMB2_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC41232.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
qs_4_scaffold_1780_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(501..821)
DNA (321bp) protein (107aa)
Uncharacterized protein id=24648344 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09476.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_4_scaffold_1780_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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963..1853
DNA (891bp) protein (297aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DAN8_HALXS
qs_4_scaffold_1780_4
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1969..3135
DNA (1167bp) protein (389aa)
NMD3 family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ48_9EURY
nonsense mediated mRNA decay-like protein
NMD3 family protein {ECO:0000313|EMBL:ERJ06848.1}; Nonsense mediated mRNA decay-like protein {ECO:0000313|EMBL:CCQ33013.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
qs_4_scaffold_1780_5
Natronococcus occultus, Natronococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3179..4399)
DNA (1221bp) protein (407aa)
WD40-like repeat protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JZA9_9EURY
WD40-like repeat protein
qs_4_scaffold_1780_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4457..6298)
DNA (1842bp) protein (614aa)
Superfamily I DNA and RNA helicase (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZV1_9EURY
Superfamily I DNA and RNA helicase {ECO:0000313|EMBL:ERG89588.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;
uvrD; repair helicase
qs_4_scaffold_1780_7
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6359..6655)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JT85_HALVA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM58319.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
qs_4_scaffold_1780_8
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6760..7107)
DNA (348bp) protein (116aa)
Transcriptional regulator n=4 Tax=Haloarcula RepID=G0HRI0_HALHT
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHB67054.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601
qs_4_scaffold_1780_9
unknown

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comp(7200..7547)
DNA (348bp) protein (116aa)

This feature has no annotations

qs_4_scaffold_1780_10
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7673..8332)
DNA (660bp) protein (220aa)
Putative DNA binding protein n=1 Tax=Halonotius sp. J07HN6 RepID=U1NV63_9EURY
Putative DNA binding protein {ECO:0000313|EMBL:ERH01259.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
Bacterio-opsin activator HTH domain protein
qs_4_scaffold_1780_11
unknown

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comp(8391..8456)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 11 items

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