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qs_4_scaffold_330

Search features with annotation key words

Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_330_trna_1
unknown

Not on your lists

comp(20..122)
DNA (103bp)
transferRNA
qs_4_scaffold_330_1
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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215..1618
DNA (1404bp) protein (468aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
tRNA cytidylyltransferase (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KGT2_HALAR
qs_4_scaffold_330_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1701..1976
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JNT5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA09624.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
qs_4_scaffold_330_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1979..2404
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN71_NATPD
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CAI50433.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_4_scaffold_330_4

Not on your lists

comp(2560..3597)
DNA (1038bp) protein (346aa)
Glucokinase {ECO:0000313|EMBL:ESS03037.1}; EC=2.7.1.2 {ECO:0000313|EMBL:ESS03037.1};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
glk; glucokinase (EC:2.7.1.2)
Glucokinase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWT7_9ARCH
qs_4_scaffold_330_5
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3790..3927)
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4ICH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04021.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
qs_4_scaffold_330_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4110..4625
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGB7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22320.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_4_scaffold_330_7
unknown

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comp(4641..5036)
DNA (396bp) protein (132aa)

This feature has no annotations

qs_4_scaffold_330_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5039..5869
DNA (831bp) protein (277aa)
hypothetical protein; K03476 L-ascorbate 6-phosphate lactonase [EC:3.1.1.-] id=24644334 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative Zn-dependent hydrolase {ECO:0000313|EMBL:ERH08568.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_4_scaffold_330_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6028..7725)
DNA (1698bp) protein (566aa)
Ion channel pore / TrkA domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4S4_NATM8
pchA3; ion channel pore / TrkA domain protein
Ion channel pore / TrkA domain protein {ECO:0000313|EMBL:CCQ37528.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomona
qs_4_scaffold_330_10

Not on your lists

comp(7775..8077)
DNA (303bp) protein (101aa)
Trk-type K+ transport system, membrane component n=1 Tax=uncultured archaeon A07HR67 RepID=V4XMG1_9ARCH
Trk-type K+ transport system, membrane component {ECO:0000313|EMBL:ESS03163.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
cation transporter
qs_4_scaffold_330_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8168..9037
DNA (870bp) protein (290aa)
hop; halorhodopsin; K04642 halorhodopsin id=24646773 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Bacteriorhodopsin {ECO:0000313|EMBL:ERH10937.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hop; halorhodopsin
qs_4_scaffold_330_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9190..11190
DNA (2001bp) protein (667aa)
bat; receiver/sensor/bat box HTH-10 family transcription regulator Bat (homolog to bacterioopsin activator) id=24646775 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH10939.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
PAS domain-containing protein
qs_4_scaffold_330_13
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11488..12276
DNA (789bp) protein (263aa)
Lycopene cyclase domain protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WS12_9EURY
Lycopene cyclase domain protein {ECO:0000313|EMBL:ELY52279.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense
lycopene cyclase domain protein
qs_4_scaffold_330_14
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12273..13310
DNA (1038bp) protein (346aa)
beta-carotene 15,15''-monooxygenase, Brp/Blh family id=24655563 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Beta-carotene 15,15''-monooxygenase, Brp/Blh family {ECO:0000313|EMBL:ERG89007.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
beta-carotene 15,15''-monooxygenase, Brp/Blh family
qs_4_scaffold_330_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13343..13603)
DNA (261bp) protein (87aa)
Transposase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K1N3_9EURY
tnp; transposase
Transposase {ECO:0000313|EMBL:EMA31027.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
qs_4_scaffold_330_16
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13654..13971)
DNA (318bp) protein (106aa)
Transposase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UWI5_HALMA
tnp; transposase
Transposase {ECO:0000313|EMBL:AAV48368.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain ATCC 4304
qs_4_scaffold_330_17
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14304..14585
DNA (282bp) protein (94aa)
Phosphocarrier protein HPr n=5 Tax=Haloferax RepID=D4GUP8_HALVD
ptsH3; phosphocarrier protein HPr
Phosphocarrier protein HPr {ECO:0000313|EMBL:ADE04358.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATC
qs_4_scaffold_330_18
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14587..15042)
DNA (456bp) protein (152aa)
PTS system, galactitol-specific enzyme II, A component (EC:2.7.1.69)
PTS system, galactitol-specific enzyme II, A component n=2 Tax=Haloferax RepID=M0HWR7_9EURY
PTS system galactitol-specific transporter subunit IIA {ECO:0000313|EMBL:CQR48679.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="H
qs_4_scaffold_330_19
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15218..15643
DNA (426bp) protein (142aa)
UPF0047 family protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GUQ4_HALVD
hypothetical protein
UPF0047 family protein {ECO:0000313|EMBL:ADE04950.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY33699.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
qs_4_scaffold_330_20
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15710..16501
DNA (792bp) protein (264aa)
Fructose-1,6-bisphosphate aldolase of the DhnA family protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G4B8_9EURY
Fructose-1,6-bisphosphate aldolase of the DhnA family protein {ECO:0000313|EMBL:ELZ65649.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" so
fbaB; fructose-1,6-bisphosphate aldolase of the DhnA family
qs_4_scaffold_330_21
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16569..17267
DNA (699bp) protein (233aa)
Triosephosphate isomerase {ECO:0000313|EMBL:ELZ79982.1}; EC=5.3.1.1 {ECO:0000313|EMBL:ELZ79982.1};; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofera
tpiA2; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H8C8_9EURY
qs_4_scaffold_330_22
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17410..17712
DNA (303bp) protein (101aa)
Presumptive arabitol PTS enzyme IIB n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G283_9EURY
Presumptive arabitol PTS enzyme IIB {ECO:0000313|EMBL:ELZ65647.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense
presumptive arabitol PTS enzyme IIB
qs_4_scaffold_330_23
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17993..19531
DNA (1539bp) protein (513aa)
Phosphotransferase system component IIC n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GUQ0_HALVD
PTS system, galactitol-specific enzyme II, C component
Galactitol permease IIC component {ECO:0000313|EMBL:CQR48678.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;
qs_4_scaffold_330_24
unknown

Not on your lists

comp(19765..20361)
DNA (597bp) protein (199aa)

This feature has no annotations

qs_4_scaffold_330_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(20644..22215)
DNA (1572bp) protein (524aa)
Choline-sulfatase n=2 Tax=Halococcus hamelinensis RepID=M0LUE0_9EURY
Choline-sulfatase {ECO:0000313|EMBL:EMA37187.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
hypothetical protein
qs_4_scaffold_330_26
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22405..23379
DNA (975bp) protein (325aa)
Fumarylacetoacetate hydrolase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B4W8_NATA1
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:ELZ04694.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATC
fumarylacetoacetate hydrolase
qs_4_scaffold_330_27
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23425..24627)
DNA (1203bp) protein (401aa)
Alcohol dehydrogenase, class IV n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L0E1_HALJP
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:EMA26996.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
alcohol dehydrogenase, class IV
qs_4_scaffold_330_28
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24850..25620)
DNA (771bp) protein (257aa)
IclR family transcriptional regulator n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VPQ3_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELY38962.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum ti
hypothetical protein
qs_4_scaffold_330_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26046..27029
DNA (984bp) protein (328aa)
ABC transporter substrate-binding protein
gloA; Lactoylglutathione lyase; K15975 glyoxalase family protein id=24658817 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ABC44718.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source=
Displaying items 1-30 of 44 in total

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