ggKbase home page

qs_4_scaffold_374

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_374_1
unknown

Not on your lists

comp(1..123)
DNA (123bp) protein (41aa)

This feature has no annotations

qs_4_scaffold_374_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(297..1526)
DNA (1230bp) protein (410aa)
subtilisin-like serine protease id=24645812 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Subtilisin-like serine protease {ECO:0000313|EMBL:ERH10030.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
subtilisin-like serine protease
qs_4_scaffold_374_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1740..2069
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DAB6_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH38199.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
qs_4_scaffold_374_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2130..2339
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JD51_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57184.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
qs_4_scaffold_374_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2597..5524)
DNA (2928bp) protein (976aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2Z986_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57185.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_4_scaffold_374_6
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5583..6197)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M0C3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39121.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
qs_4_scaffold_374_7
unknown

Not on your lists

comp(6393..6965)
DNA (573bp) protein (191aa)

This feature has no annotations

qs_4_scaffold_374_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7051..8916
DNA (1866bp) protein (622aa)
PilT protein domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NX73_HALMD
ATPase
PilT protein domain protein {ECO:0000313|EMBL:ACV46438.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohat
qs_4_scaffold_374_9
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9099..10403)
DNA (1305bp) protein (435aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=543526 species="Archaea; Eur
Histidine--tRNA ligase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQH4_HALTV
qs_4_scaffold_374_10

Not on your lists

10628..11410
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4X7X7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS03809.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
qs_4_scaffold_374_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11376..11765
DNA (390bp) protein (130aa)
FAD linked oxidase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8T2_CONWI
FAD linked oxidase
FAD linked oxidase domain protein {ECO:0000313|EMBL:ADB51046.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexi
qs_4_scaffold_374_12
unknown

Not on your lists

11824..12183
DNA (360bp) protein (120aa)

This feature has no annotations

qs_4_scaffold_374_13
unknown

Not on your lists

12180..12716
DNA (537bp) protein (179aa)

This feature has no annotations

qs_4_scaffold_374_14

Not on your lists

12859..14025
DNA (1167bp) protein (389aa)
ABC-type phosphate/phosphonate transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR60 RepID=V4YH19_9ARCH
ABC-type phosphate/phosphonate transport system, periplasmic component {ECO:0000313|EMBL:ESS12476.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
phnD1; putative phosphate/phosphonate ABC transporter periplasmic substrate-binding protein
qs_4_scaffold_374_15
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14049..14834
DNA (786bp) protein (262aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbale
ABC transporter n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZXT5_9EURY
ABC transporter
qs_4_scaffold_374_16
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14831..15901
DNA (1071bp) protein (357aa)
Phosphonate ABC transporter permease n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NV20_9EURY
Phosphonate ABC transporter permease {ECO:0000313|EMBL:EMA61418.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyt
phosphonate ABC transporter permease
qs_4_scaffold_374_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16045..17085)
DNA (1041bp) protein (347aa)
Phosphohydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML61_9EURY
Phosphohydrolase {ECO:0000313|EMBL:EMA46103.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 535
Ser/Thr protein phosphatase family protein family
qs_4_scaffold_374_18
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17264..18607
DNA (1344bp) protein (448aa)
Major facilitator superfamily protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P8H5_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:EMA65115.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aiding
transporter
qs_4_scaffold_374_19
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19036..19824
DNA (789bp) protein (263aa)
Arabinose operon protein AraL n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KPZ0_HALAR
Arabinose operon protein AraL {ECO:0000313|EMBL:EMA23402.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinen
araL1; arabinose operon protein AraL
qs_4_scaffold_374_20
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19949..20200
DNA (252bp) protein (84aa)
hypothetical protein id=24649551 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10640.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_4_scaffold_374_21
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20321..21637
DNA (1317bp) protein (439aa)
IS1341-type transposase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X102_9EURY
IS1341-type transposase {ECO:0000313|EMBL:ELY55400.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
transposase
qs_4_scaffold_374_trna_1
unknown

Not on your lists

21713..21814
DNA (102bp)
transferRNA
qs_4_scaffold_374_22
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21971..24616
DNA (2646bp) protein (882aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CQA4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24567.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
qs_4_scaffold_374_23
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24793..25038
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XIC9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY61367.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
qs_4_scaffold_374_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25070..25909)
DNA (840bp) protein (280aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJF1_9EURY
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:EMA45483.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
ThiJ/PfpI domain-containing protein
qs_4_scaffold_374_25
unknown

Not on your lists

25912..26160
DNA (249bp) protein (83aa)

This feature has no annotations

qs_4_scaffold_374_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26226..26939)
DNA (714bp) protein (238aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAG5_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA42782.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase/reductase SDR
qs_4_scaffold_374_27
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27006..28178)
DNA (1173bp) protein (391aa)
Tryptophanyl-tRNA ligase {ECO:0000313|EMBL:ELZ61310.1}; EC=6.1.1.2 {ECO:0000313|EMBL:ELZ61310.1};; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA ligase n=3 Tax=Haloferax RepID=M0FMX9_9EURY
qs_4_scaffold_374_28
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28581..28826
DNA (246bp) protein (82aa)
Ferredoxin n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZDG5_9EURY
Ferredoxin {ECO:0000313|EMBL:ELY84510.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
ferredoxin
qs_4_scaffold_374_29
unknown

Not on your lists

28897..28986
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying items 1-30 of 53 in total

View Taxonomy