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qs_4_scaffold_550

Search features with annotation key words

Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_550_1
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(289..753)
DNA (465bp) protein (155aa)
ndk; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
Nucleoside diphosphate kinase n=2 Tax=Haloarcula argentinensis RepID=M0KTZ5_HALAR
qs_4_scaffold_550_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(750..1241)
DNA (492bp) protein (164aa)
Ribosomal protein L24E n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZG1_HALMD
50S ribosomal protein L24E
Ribosomal protein L24E {ECO:0000313|EMBL:ACV48729.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (
qs_4_scaffold_550_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1241..1483)
DNA (243bp) protein (81aa)
30S ribosomal protein S28e n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZG0_HALMD
30S ribosomal protein S28e
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muko
qs_4_scaffold_550_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1575..1937)
DNA (363bp) protein (121aa)
50S ribosomal protein L7Ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQV5_9EURY
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
rpl7ae; 50S ribosomal protein L7Ae
qs_4_scaffold_550_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2178..2351
DNA (174bp) protein (58aa)
50S ribosomal protein L18Ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D464_9EURY
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=797114 sp
rplX; 50S ribosomal protein LX
qs_4_scaffold_550_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2348..2830
DNA (483bp) protein (161aa)
prefoldin subunit alpha; K04797 prefoldin alpha subunit id=24645681 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source=
pfdA; prefoldin alpha subunit
qs_4_scaffold_550_7
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2841..4190
DNA (1350bp) protein (450aa)
Signal recognition particle receptor FtsY n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQJ6_HALAR
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobac
dpa; signal recognition particle receptor
qs_4_scaffold_550_8
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4229..4666
DNA (438bp) protein (146aa)
GCN5-related N-acetyltransferase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RU54_HALTV
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADB59123.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmeni
qs_4_scaffold_550_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4887..6512
DNA (1626bp) protein (542aa)
Deoxyribodipyrimidine photolyase-related protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6P9_9EURY
Deoxyribodipyrimidine photolyase-related protein {ECO:0000313|EMBL:ELZ30488.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Ha
deoxyribodipyrimidine photolyase-related protein
qs_4_scaffold_550_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6623..8278)
DNA (1656bp) protein (552aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1227453 species="Archaea; Euryarcha
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IVJ7_HALVA
qs_4_scaffold_550_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8275..8961)
DNA (687bp) protein (229aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055191}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055
uridylate kinase n=1 Tax=Halomicrobium katesii RepID=UPI000366759F
pyrH; uridylate kinase
qs_4_scaffold_550_12
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9343..9585
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6D335_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ33810.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qs_4_scaffold_550_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9831..10979
DNA (1149bp) protein (383aa)
Peptidase M50 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2U5_HALMD
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ACV47417.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain AT
qs_4_scaffold_550_14
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10999..11943)
DNA (945bp) protein (315aa)
Thiamine-monophosphate kinase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KA44_9EURY
thiL; thiamine monophosphate kinase
Thiamine monophosphate kinase {ECO:0000313|EMBL:AAV47883.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui
qs_4_scaffold_550_15
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12086..13219
DNA (1134bp) protein (378aa)
ABC transporter n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DPI5_9EURY
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000313|EMBL:CQR52070.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="
ABC transporter
qs_4_scaffold_550_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13330..14604
DNA (1275bp) protein (425aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_0
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GU69_9EURY
qs_4_scaffold_550_17
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14982..16466
DNA (1485bp) protein (495aa)
Extracellular ligand-binding receptor n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HEQ6_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ELZ82232.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii
ABC-type branched-chain amino acid transport system, periplasmic component
qs_4_scaffold_550_18
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16498..17382
DNA (885bp) protein (295aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I9U8_HALRX
branched-chain amino acid ABC-type transport system, permease component
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:AGB15016.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloviva
qs_4_scaffold_550_19
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17379..18428
DNA (1050bp) protein (350aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IAN4_HALRX
ABC-type branched-chain amino acid transport system, permease component
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:AGB15017.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloviva
qs_4_scaffold_550_20
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18425..19180
DNA (756bp) protein (252aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I888_HALRX
ABC-type branched-chain amino acid transport systems, ATPase component
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:AGB15018.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax
qs_4_scaffold_550_21
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19250..20518
DNA (1269bp) protein (423aa)
Sugar phosphate permease n=1 Tax=halophilic archaeon J07HX64 RepID=U1PI16_9EURY
Sugar phosphate permease {ECO:0000313|EMBL:ERH10071.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
major facilitator superfamily protein rbh
qs_4_scaffold_550_22
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20612..21820
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MI27_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89004.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
TrkA-C domain-containing protein
qs_4_scaffold_550_23
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21841..22356)
DNA (516bp) protein (172aa)
MgtE integral membrane region n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XDU1_9EURY
MgtE integral membrane region {ECO:0000313|EMBL:ELY59890.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
cation transporter
qs_4_scaffold_550_24
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22407..22982)
DNA (576bp) protein (192aa)
MgtE integral membrane region n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M7E4_9EURY
MgtE integral membrane region {ECO:0000313|EMBL:EMA41631.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducen
cation transporter
qs_4_scaffold_550_25
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23080..23451)
DNA (372bp) protein (124aa)
hypothetical protein id=24647151 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08293.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_4_scaffold_550_26
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23493..24617)
DNA (1125bp) protein (375aa)
aspB2; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L851_HALJP
Aspartate aminotransferase {ECO:0000313|EMBL:EMA29263.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM
qs_4_scaffold_550_27
unknown

Not on your lists

comp(24815..26134)
DNA (1320bp) protein (440aa)

This feature has no annotations

qs_4_scaffold_550_28
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26516..27679
DNA (1164bp) protein (388aa)
Indoleamine 2,3-dioxygenase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IC08_HALRX
Indoleamine 2,3-dioxygenase
Indoleamine 2,3-dioxygenase {ECO:0000313|EMBL:AGB17110.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 181
qs_4_scaffold_550_29
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27833..29479
DNA (1647bp) protein (549aa)
Benzoate-CoA ligase family n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IFU8_HALRX
benzoate-CoA ligase family
Benzoate-CoA ligase family {ECO:0000313|EMBL:AGB17106.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 1819
qs_4_scaffold_550_30
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29526..30812)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D393_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29323.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
Displaying items 1-30 of 34 in total

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