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qs_4_scaffold_640

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_640_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..255
DNA (255bp) protein (85aa)
Transcription regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JB67_HALJB
transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:ADJ16520.1}; Transcriptional regulator {ECO:0000313|EMBL:ELY41385.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
qs_4_scaffold_640_trna_1
unknown

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623..697
DNA (75bp)
transferRNA
qs_4_scaffold_640_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(884..1843)
DNA (960bp) protein (320aa)
Nucleotidyl transferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0X6_HALMD
nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:ACV48991.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_640_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1926..2216
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1V0_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV49190.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_640_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2274..3146)
DNA (873bp) protein (291aa)
aminotransferase class IV; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] id=24648046 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Branched chain amino acid aminotransferase apoenzyme {ECO:0000313|EMBL:ERH09176.1}; EC=2.6.1.42 {ECO:0000313|EMBL:ERH09176.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteri
aminotransferase class IV
qs_4_scaffold_640_5

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comp(3149..3346)
DNA (198bp) protein (66aa)
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase n=1 Tax=uncultured archaeon A07HR60 RepID=V4XVN4_9ARCH
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase {ECO:0000313|EMBL:ESS12689.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon
qs_4_scaffold_640_6
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3628..4602)
DNA (975bp) protein (325aa)
Phosphoadenosine phosphosulfate reductase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D669_HALXS
phosphoadenosine phosphosulfate reductase
Phosphoadenosine phosphosulfate reductase {ECO:0000313|EMBL:AEH35525.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanadue
qs_4_scaffold_640_7
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4899..5495
DNA (597bp) protein (199aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
msrA; methionine sulfoxide reductase A (EC:1.8.4.11)
peptide methionine sulfoxide reductase n=1 Tax=Halorubrum sp. T3 RepID=UPI00036FCCAC
qs_4_scaffold_640_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5499..6845)
DNA (1347bp) protein (449aa)
hypothetical protein id=24615246 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
CHRD domain containing protein {ECO:0000313|EMBL:ESP88410.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
hypothetical protein
qs_4_scaffold_640_9
unknown

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comp(7193..7576)
DNA (384bp) protein (128aa)

This feature has no annotations

qs_4_scaffold_640_10
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7716..8192)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HS16_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM58353.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
qs_4_scaffold_640_trna_2
unknown

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8277..8350
DNA (74bp)
transferRNA
qs_4_scaffold_640_11
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8485..8754)
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5V017_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA16600.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
qs_4_scaffold_640_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8763..11456)
DNA (2694bp) protein (898aa)
coxA2; cytochrome c oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase subunit I n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0S5_9EURY
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:ELZ27759.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
qs_4_scaffold_640_13
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11456..12229)
DNA (774bp) protein (258aa)
Cytochrome C oxidase subunit II n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C3X1_9EURY
Cytochrome C oxidase subunit II {ECO:0000313|EMBL:ELZ17373.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina J
cytochrome C oxidase subunit II
qs_4_scaffold_640_14
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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12356..13099
DNA (744bp) protein (248aa)
Creatininase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WNY4_9EURY
Creatininase {ECO:0000313|EMBL:ELY51087.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 10635.;"
Creatininase
qs_4_scaffold_640_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13184..13618)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LK17_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA33957.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_4_scaffold_640_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14049..15272
DNA (1224bp) protein (408aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] id=24647989 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Phosphoglycerate kinase {ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|RuleBase:RU000532};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
pgk; phosphoglycerate kinase (EC:2.7.2.3)
qs_4_scaffold_640_17
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16801..17484
DNA (684bp) protein (228aa)
Uncharacterized protein n=3 Tax=Halobacterium salinarum RepID=B0R9X8_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP15559.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (
qs_4_scaffold_640_18
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17626..19464
DNA (1839bp) protein (613aa)
Smc-like protein Sph1 n=2 Tax=Halobacterium salinarum RepID=SPH1_HALS3
sph1; SMC-like protein sph1
Smc-like protein Sph1; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (strain ATCC 700922 / JCM 11081 /
qs_4_scaffold_640_19

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comp(19772..20530)
DNA (759bp) protein (253aa)
Transcriptional regulator, IclR family n=1 Tax=halophilic archaeon DL31 RepID=G2MJG0_9ARCH
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEN04861.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Displaying 21 items

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