ggKbase home page

qs_4_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 53 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_67_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

252..1991
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7I4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53836.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_67_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1996..2355
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAZ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53835.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_4_scaffold_67_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2352..2909
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQ65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24522.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_4_scaffold_67_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2913..5987)
DNA (3075bp) protein (1025aa)
FAD-dependent oxidoreductase (GlcD/DLD_GlcF/GlpC domain fusion protein) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYX0_NATM8
FAD-dependent oxidoreductase (GlcD/DLD_GlcF/GlpC domain fusion protein) {ECO:0000313|EMBL:CCQ35333.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
FAD-dependent oxidoreductase (GlcD/DLD_GlcF/GlpC domain fusion protein)
qs_4_scaffold_67_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6025..8298)
DNA (2274bp) protein (758aa)
Probable iron-sulfur protein (4Fe-4S) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNW8_NATM8
Probable iron-sulfur protein (4Fe-4S) {ECO:0000313|EMBL:CCQ35697.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
probable iron-sulfur protein (4Fe-4S)
qs_4_scaffold_67_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8295..8810)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP09_NATM8
hypothetical protein
DUF162 family protein {ECO:0000313|EMBL:CCQ35696.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
qs_4_scaffold_67_7
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8962..11667
DNA (2706bp) protein (902aa)
Phosphoenolpyruvate carboxylase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KPN6_9EURY
Phosphoenolpyruvate carboxylase {ECO:0000313|EMBL:AJF26788.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1
phosphoenolpyruvate carboxylase
qs_4_scaffold_67_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11750..12544)
DNA (795bp) protein (265aa)
metallo-beta-lactamase family hydrolase id=24644066 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Zn-dependent hydrolase {ECO:0000313|EMBL:ERH08294.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
metallo-beta-lactamase family hydrolase
qs_4_scaffold_67_9
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12763..14034
DNA (1272bp) protein (424aa)
gcvP1; glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Glycine dehydrogenase subunit 1 {ECO:0000313|EMBL:AAV46420.1}; EC=1.4.4.2 {ECO:0000313|EMBL:AAV46420.1};; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Glycine dehydrogenase subunit 1 n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V232_HALMA
qs_4_scaffold_67_10
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14102..15553
DNA (1452bp) protein (484aa)
Aminotransferase class V n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6Y7_HALXS
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:AEH35416.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM
qs_4_scaffold_67_11
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15670..16047)
DNA (378bp) protein (126aa)
Signal-transducing histidine kinase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPZ5_HALMO
Signal-transducing histidine kinase {ECO:0000313|EMBL:EMA47716.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrh
multi-sensor signal transduction histidine kinase
qs_4_scaffold_67_12
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16333..16923
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L7G7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA27905.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qs_4_scaffold_67_13
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16974..17489
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EAG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ43998.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
qs_4_scaffold_67_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17607..21455
DNA (3849bp) protein (1283aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00035DC2A2
Uncharacterized protein {ECO:0000313|EMBL:ELZ26925.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_67_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21813..22088
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP81_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35816.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_4_scaffold_67_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22243..23580
DNA (1338bp) protein (446aa)
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:ERH09127.1}; EC=2.3.3.10 {ECO:0000313|EMBL:ERH09127.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="ha
hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
hydroxymethylglutaryl-CoA synthase id=24647999 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
qs_4_scaffold_67_17
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23586..24293)
DNA (708bp) protein (236aa)
XRE family transcriptional regulator n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KGB9_HALAR
XRE family transcriptional regulator {ECO:0000313|EMBL:EMA18875.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula arg
XRE family transcriptional regulator
qs_4_scaffold_67_18
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24385..25038)
DNA (654bp) protein (218aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=2 Tax=Halorubrum RepID=M0EKZ8_9EURY
3-isopropylmalate dehydratase small subunit {ECO:0000313|EMBL:ELZ47079.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
qs_4_scaffold_67_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25038..26501)
DNA (1464bp) protein (488aa)
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate is
3-isopropylmalate dehydratase large subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSF8_NATM8
qs_4_scaffold_67_20
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26498..26956)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BIG7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ09434.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
qs_4_scaffold_67_21
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26949..27962)
DNA (1014bp) protein (338aa)
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] id=24649275 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hyd
ketol-acid reductoisomerase (EC:1.1.1.86)
qs_4_scaffold_67_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27955..28614)
DNA (660bp) protein (220aa)
acetolactate synthase small subunit (EC:2.2.1.6); K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] id=24646188 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Acetolactate synthase, small subunit {ECO:0000313|EMBL:ERH10367.1}; EC=2.2.1.6 {ECO:0000313|EMBL:ERH10367.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="h
ilvN; acetolactate synthase small subunit (EC:2.2.1.6)
qs_4_scaffold_67_23
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28615..30450)
DNA (1836bp) protein (612aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] id=24646187 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic a
acetolactate synthase large subunit
qs_4_scaffold_67_24
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30837..31877)
DNA (1041bp) protein (347aa)
2-isopropylmalate synthase (EC:2.3.3.13) id=24649272 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
2-isopropylmalate synthase {ECO:0000313|EMBL:ERH10365.1}; EC=2.3.3.13 {ECO:0000313|EMBL:ERH10365.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
pyruvate carboxyltransferase
qs_4_scaffold_67_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32229..33356)
DNA (1128bp) protein (376aa)
ORC1-type DNA replication protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1C3_HALMD
orc1/cdc6 family replication initiation protein
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobi
qs_4_scaffold_67_26
unknown

Not on your lists

33550..33744
DNA (195bp) protein (65aa)

This feature has no annotations

qs_4_scaffold_67_27
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33751..35787)
DNA (2037bp) protein (679aa)
DNA-binding protein MutS2 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KY34_9EURY
DNA-binding protein MutS2 {ECO:0000256|HAMAP-Rule:MF_00971}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytic
DNA mismatch repair protein MutS
qs_4_scaffold_67_28
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(35834..37447)
DNA (1614bp) protein (538aa)
Probable histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229};; TaxID=1210908 species="Archaea; E
Probable histidine ammonia-lyase n=1 Tax=Halogranum salarium B-1 RepID=J3EXD0_9EURY
histidine ammonia-lyase
qs_4_scaffold_67_29
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(37444..38778)
DNA (1335bp) protein (445aa)
hutI; imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase {ECO:0000255|HAMAP-Rule:MF_00372}; EC=3.5.2.7 {ECO:0000255|HAMAP-Rule:MF_00372};; Imidazolone-5-propionate hydrolase {ECO:0000255|HAMAP-Rule:MF_00372}; TaxID=64091 species="Archa
Probable imidazolonepropionase n=2 Tax=Halobacterium salinarum RepID=HUTI_HALS3
qs_4_scaffold_67_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(38771..39772)
DNA (1002bp) protein (334aa)
formiminoglutamase (EC:3.5.3.8)
Formimidoylglutamase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N948_9EURY
Formimidoylglutamase {ECO:0000313|EMBL:EMA53175.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 898
Displaying items 1-30 of 53 in total

View Taxonomy