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qs_4_scaffold_689

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_689_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..718)
DNA (717bp) protein (239aa)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0W8_9EURY
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:ELZ29151.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" sou
branched-chain alpha-keto acid dehydrogenase subunit E2
qs_4_scaffold_689_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(721..1719)
DNA (999bp) protein (333aa)
Transketolase central region n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N015_9EURY
Transketolase central region {ECO:0000313|EMBL:EMA49990.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
qs_4_scaffold_689_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1724..2860)
DNA (1137bp) protein (379aa)
pdhA3; pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1 1.2.4.4); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] id=24650007 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Pyruvate dehydrogenase E1 component, alpha subunit {ECO:0000313|EMBL:ERH11087.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
pyruvate dehydrogenase E1 component, alpha subunit
qs_4_scaffold_689_4
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3198..3854
DNA (657bp) protein (219aa)
GMP synthase (Glutamine-hydrolyzing), subunit A n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X942_9EURY
GMP synthase (Glutamine-hydrolyzing), subunit A {ECO:0000313|EMBL:ELY58112.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natron
GMP synthase family protein
qs_4_scaffold_689_5
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3857..4753)
DNA (897bp) protein (299aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
lipA; lipoyl synthase (EC:2.8.1.8)
Probable lipoyl synthase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KIJ9_HALAR
qs_4_scaffold_689_6
unknown

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comp(5322..5768)
DNA (447bp) protein (149aa)

This feature has no annotations

qs_4_scaffold_689_7
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6100..7551)
DNA (1452bp) protein (484aa)
Aldehyde dehydrogenase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WRF2_9EURY
Aldehyde dehydrogenase {ECO:0000313|EMBL:ELY51801.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 1879
NAD-dependent aldehyde dehydrogenase
qs_4_scaffold_689_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7613..8752)
DNA (1140bp) protein (380aa)
Spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JUA0_9EURY
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA07706.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" so
spermidine/putrescine ABC transporter ATP-binding protein
qs_4_scaffold_689_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8742..10454)
DNA (1713bp) protein (571aa)
ABC-type transporter, integral membrane subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MHS2_9ARCH
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADJ14031.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halal
qs_4_scaffold_689_10
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10543..11775)
DNA (1233bp) protein (411aa)
Thiamine-binding periplasmic protein-like protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KR10_HALAR
Thiamine-binding periplasmic protein-like protein {ECO:0000313|EMBL:EMA23661.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
ABC transporter substrate-binding protein
qs_4_scaffold_689_11
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11975..12349
DNA (375bp) protein (125aa)
Putative endonuclease containing a URI domain protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1P7N8_9EURY
Putative endonuclease containing a URI domain protein {ECO:0000313|EMBL:ERG89572.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.
hypothetical protein
qs_4_scaffold_689_12
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12978..15080)
DNA (2103bp) protein (701aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LP11_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM57099.1}; Flags: Precursor;; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum la
qs_4_scaffold_689_13
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(15306..15611)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P2U6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA64148.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
qs_4_scaffold_689_14
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(15718..15999)
DNA (282bp) protein (94aa)
ArsR family transcriptional regulator n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W9T9_9EURY
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AGN01784.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp
qs_4_scaffold_689_15
Haloferax sp. ATCC BAA-644, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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16205..17458
DNA (1254bp) protein (418aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945, ECO:0000313|EMBL:ELZ65410.1}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945, ECO:0000313|EMBL:ELZ65410.1};; TaxID=1227462 species="Archaea; Euryarchaeota
thrC3; threonine synthase (EC:4.2.3.1)
Threonine synthase n=3 Tax=Haloferax RepID=M0FFH2_9EURY
qs_4_scaffold_689_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17528..18853)
DNA (1326bp) protein (442aa)
arylsulfatase; choline-sulfatase (EC:3.1.6.6 3.1.6.1)
Arylsulfatase A related enzyme n=1 Tax=halophilic archaeon J07HX64 RepID=U1P0J0_9EURY
Arylsulfatase A related enzyme {ECO:0000313|EMBL:ERH10090.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_4_scaffold_689_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18923..19081)
DNA (159bp) protein (53aa)
secG; protein translocase subunit SecG id=24644703 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Preprotein translocase subunit SecG {ECO:0000256|HAMAP-Rule:MF_00751}; Protein transport protein Sec61 subunit beta homolog {ECO:0000256|HAMAP-Rule:MF_00751}; TaxID=1085028 species="Archaea; Euryarcha
preprotein translocase subunit secG
Displaying 17 items

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