ggKbase home page

qs_4_scaffold_942

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_942_1
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(367..3537)
DNA (3171bp) protein (1057aa)
RND transporter, HAE1 family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VK01_9CYAN
RND transporter, HAE1 family {ECO:0000313|EMBL:EDX77706.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonopla
hydrophobe/amphiphile efflux-1 (HAE1) family transporter rbh
qs_4_scaffold_942_2
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(3846..4247)
DNA (402bp) protein (134aa)
S23 ribosomal protein n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8LYQ9_9CYAN
S23 ribosomal protein {ECO:0000313|EMBL:ELS02799.1}; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
protein of unknown function TIGR02436
qs_4_scaffold_942_3
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4335..5762)
DNA (1428bp) protein (476aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S9Z7_9CYAN
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AFY66604.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema
qs_4_scaffold_942_4
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5918..7111)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00030587F1
Major facilitator superfamily protein {ECO:0000313|EMBL:ESA37907.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. He
major facilitator superfamily MFS_1
qs_4_scaffold_942_5
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7213..7686)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KZI4_9SYNC
NADP oxidoreductase coenzyme F420-dependent
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:AFZ58458.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC
qs_4_scaffold_942_6
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7656..7916)
DNA (261bp) protein (87aa)
Short-chain alcohol dehydrogenase n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RAG0_9CYAN
short-chain alcohol dehydrogenase
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:AFY54416.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
qs_4_scaffold_942_7
unknown

Not on your lists

comp(8124..8447)
DNA (324bp) protein (108aa)

This feature has no annotations

qs_4_scaffold_942_8
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(8528..9439)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002D3125E
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:KIF35935.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
NmrA family protein
qs_4_scaffold_942_9
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9554..9943)
DNA (390bp) protein (130aa)
DNA recombination protein RmuC n=1 Tax=cyanobacterium PCC 7702 RepID=UPI000373034D
DNA starvation/stationary phase protection protein Dps
Ferritin Dps family protein {ECO:0000313|EMBL:ACK70927.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (S
qs_4_scaffold_942_10
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11305..12942
DNA (1638bp) protein (546aa)
Choline/carnitine/betaine transport n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GU87_9GAMM
High-affinity choline uptake protein BetT {ECO:0000313|EMBL:KGE05173.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rub
choline/carnitine/betaine transport
qs_4_scaffold_942_11
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13275..13604
DNA (330bp) protein (110aa)
UPF0145 protein Mic7113_3814 n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WI98_9CYAN
hypothetical protein
UPF0145 protein Mic7113_3814 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.
qs_4_scaffold_942_12
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(13601..14059)
DNA (459bp) protein (153aa)
Raf kinase inhibitor-like protein, YbhB/YbcL family n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T8D3_9CYAN
Raf kinase inhibitor-like protein, YbhB/YbcL family
Raf kinase inhibitor-like protein, YbhB/YbcL family {ECO:0000313|EMBL:AFY78371.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_4_scaffold_942_13
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

14629..15969
DNA (1341bp) protein (447aa)
Transporter id=2942355 bin=GWA1_Deltaproteobacteria_52_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
sodium:neurotransmitter symporter; K03308 neurotransmitter:Na+ symporter, NSS family Tax=GWA1_Bdellovibrionales_52_35_curated
sodium:neurotransmitter symporter
qs_4_scaffold_942_14
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16142..17425
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034B3553
trypsin-like serine protease with C-terminal PDZ domain
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:AFZ18056.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Mi
qs_4_scaffold_942_15
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

18211..21237
DNA (3027bp) protein (1009aa)
Exonuclease SbcC n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T5R3_9CYAN
Exonuclease SbcC {ECO:0000313|EMBL:AFY77865.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
exonuclease SbcC
qs_4_scaffold_942_16
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21951..23543
DNA (1593bp) protein (531aa)
Cation transporter n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JCT2_HALJB
cation transporter
Cation transporter {ECO:0000313|EMBL:ADJ16827.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (st
qs_4_scaffold_942_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23709..24377
DNA (669bp) protein (223aa)
TrkA-N domain protein id=24613654 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
TrkA-N domain protein {ECO:0000313|EMBL:ESP89714.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonu
TrkA-N domain protein
qs_4_scaffold_942_18
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24527..24868)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DPU2_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:ERN42609.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Rubidibacter lacunae KORDI 51-2.;"
hypothetical protein
Displaying 18 items

View Taxonomy