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qs_4_scaffold_158

Search features with annotation key words

Displaying items 1-30 of 111 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_158_1
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..1501
DNA (1500bp) protein (500aa)
Putative PAS/PAC sensor protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NSH4_HALUD
Uncharacterized protein {ECO:0000313|EMBL:KDE59590.1}; Flags: Fragment;; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnic
hypothetical protein
qs_4_scaffold_158_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1502..2164)
DNA (663bp) protein (221aa)
ugpQ; glycerophosphodiester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:CAI50271.1}; EC=3.1.4.46 {ECO:0000313|EMBL:CAI50271.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Glycerophosphodiester phosphodiesterase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INN1_NATPD
qs_4_scaffold_158_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2528..3844
DNA (1317bp) protein (439aa)
Transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1V2_9EURY
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
nac; sodium-and chloride-dependent transporter
qs_4_scaffold_158_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4573..6123
DNA (1551bp) protein (517aa)
accB_2; acyl-CoA carboxylase 2, carboxyltransferase component (beta subunit) (EC:6.4.1.-)
Propionyl-CoA carboxylase carboxyltransferase component {ECO:0000313|EMBL:CAI50273.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CAI50273.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
Propionyl-CoA carboxylase carboxyltransferase component n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INM9_NATPD
qs_4_scaffold_158_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6126..6365
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAQ7_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14779.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_4_scaffold_158_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6369..8177)
DNA (1809bp) protein (603aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P166_HALMD
PAS/PAC sensor signal transduction histidine kinase
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACV49081.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" sourc
qs_4_scaffold_158_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8358..10199
DNA (1842bp) protein (614aa)
accA_2; biotin carboxylase 1, acyl-CoA carboxylase, alpha subunit 2 (EC:6.3.4.14)
Propionyl-CoA carboxylase biotin carboxylase component {ECO:0000313|EMBL:CAI50275.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CAI50275.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteri
Propionyl-CoA carboxylase biotin carboxylase component n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INM7_NATPD
qs_4_scaffold_158_8
unknown

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10243..10434
DNA (192bp) protein (64aa)

This feature has no annotations

qs_4_scaffold_158_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10978..12408
DNA (1431bp) protein (477aa)
Sensor box histidine kinase {ECO:0000313|EMBL:CAI49769.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CAI49769.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Sensor box histidine kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ29_NATPD
signal-transducing histidine kinase
qs_4_scaffold_158_10
unknown

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comp(12492..12629)
DNA (138bp) protein (46aa)

This feature has no annotations

qs_4_scaffold_158_11
unknown

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comp(12862..13314)
DNA (453bp) protein (151aa)

This feature has no annotations

qs_4_scaffold_158_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13942..14466)
DNA (525bp) protein (175aa)
GNAT family acetyltransferase (EC:2.3.1.-)
GNAT family acetyltransferase {ECO:0000313|EMBL:CCQ36595.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCQ36595.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
GNAT family acetyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y287_NATM8
qs_4_scaffold_158_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14470..15654)
DNA (1185bp) protein (395aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Phosphoglycerate kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PGK_NATPD
qs_4_scaffold_158_14
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15820..17049
DNA (1230bp) protein (410aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRS3_HALBP
amino acid/amide ABC transporter membrane protein 1, haat family
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ADQ66860.1}; Amino acid/amide ABC transporter membrane protein 1, haat family {ECO:0000313|EMBL:ELY30368.1}; TaxID=46
qs_4_scaffold_158_15
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17046..18410
DNA (1365bp) protein (455aa)
ABC-type branched-chain amino acid transport system, permease protein II n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R8C7_HALMT
livM; ABC-type branched-chain amino acid transport system, permease protein II
ABC-type branched-chain amino acid transport system, permease protein II {ECO:0000313|EMBL:AFK20487.1}; Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:AHZ23848.1}; TaxID=523841 s
qs_4_scaffold_158_16

Not on your lists

18403..19308
DNA (906bp) protein (302aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=uncultured archaeon A07HR67 RepID=V4XZN0_9ARCH
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ESS04097.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
livG1; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
qs_4_scaffold_158_17
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19305..20066
DNA (762bp) protein (254aa)
ABC transporter n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HPA5_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ86425.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717.;"
livF3; putative branched-chain amino acids ABC transporter ATP-binding protein
qs_4_scaffold_158_18
uncultured haloarchaeon, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20392..21711)
DNA (1320bp) protein (440aa)
ABC-type branched-chain amino acid transport systems, substrate-binding protein n=1 Tax=uncultured haloarchaeon RepID=A5YSQ8_9EURY
ABC-type branched-chain amino acid transport systems, substrate-binding protein {ECO:0000313|EMBL:ABQ76015.1}; TaxID=160804 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
livJ; ABC-type branched-chain amino acid transport systems, substrate-binding protein
qs_4_scaffold_158_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22689..22991)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQY5_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36587.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_4_scaffold_158_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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23114..23764
DNA (651bp) protein (217aa)
DNA binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N480_9EURY
DNA binding protein {ECO:0000313|EMBL:EMA51914.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
Bacterio-opsin activator HTH domain protein
qs_4_scaffold_158_21
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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23839..24894
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C8K2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ18687.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qs_4_scaffold_158_22
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24979..25263
DNA (285bp) protein (95aa)
hypothetical protein id=24649966 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:CDK40301.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
qs_4_scaffold_158_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25271..25741)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKA7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35554.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_4_scaffold_158_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25908..27548
DNA (1641bp) protein (547aa)
Type II/IV secretion system ATPase protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQF2_NATPD
ATPase
Type II/IV secretion system ATPase protein {ECO:0000313|EMBL:CAI49644.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
qs_4_scaffold_158_25
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27548..29641
DNA (2094bp) protein (698aa)
Type II/IV secretion system transmembrane protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZG7_NATM8
type II/IV secretion system transmembrane protein
Type II/IV secretion system transmembrane protein {ECO:0000313|EMBL:CCQ35556.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="
qs_4_scaffold_158_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29686..30324
DNA (639bp) protein (213aa)
probable S-adenosylmethionine-dependent methyltransferase (EC:2.1.1.-)
Probable S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:CCQ35557.1}; EC=2.1.1.- {ECO:0000313|EMBL:CCQ35557.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobact
Probable S-adenosylmethionine-dependent methyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNP7_NATM8
qs_4_scaffold_158_trna_1
unknown

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30484..30554
DNA (71bp)
transferRNA
qs_4_scaffold_158_27
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31341..33164
DNA (1824bp) protein (608aa)
Type IV pilus biogenesis complex ATPase subunit n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HHM7_9EURY
Type IV pilus biogenesis complex ATPase subunit {ECO:0000313|EMBL:ELZ82589.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofera
pilB5; type IV pilus biogenesis complex ATPase subunit
qs_4_scaffold_158_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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33161..35182
DNA (2022bp) protein (674aa)
Type II/IV secretion system transmembrane protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQP8_NATPD
transmembrane protein (type II secretion system proteins TadC)
Type II/IV secretion system transmembrane protein {ECO:0000313|EMBL:CAI49546.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="
qs_4_scaffold_158_29
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

35184..36824
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JFL8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59336.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
Displaying items 1-30 of 111 in total

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