ggKbase home page

qs_4_scaffold_17

Search features with annotation key words

Displaying items 121-150 of 302 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_17_121
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(127200..127919)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L5G3_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28328.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein rbh
qs_4_scaffold_17_122
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

128179..128604
DNA (426bp) protein (142aa)
Succinate-semialdehyde dehydrogenase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0H8Y8_9EURY
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ELZ80309.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii
gabD; succinate-semialdehyde dehydrogenase
qs_4_scaffold_17_123
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

128758..130011
DNA (1254bp) protein (418aa)
Amino acid-binding protein n=2 Tax=Haloarcula hispanica RepID=G0HYW7_HALHT
amino acid-binding protein
Amino acid-binding protein {ECO:0000313|EMBL:AEM59018.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (str
qs_4_scaffold_17_124
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

130018..132048
DNA (2031bp) protein (677aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UWE8_HALMA
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:AAV48405.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" s
livH-9; branched-chain amino acid ABC transporter permease
qs_4_scaffold_17_125
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

132041..132805
DNA (765bp) protein (255aa)
livG-10; branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein id=24646839 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ERH11005.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic ar
livG-10; branched-chain amino acid ABC transporter ATP-binding protein
qs_4_scaffold_17_126
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

132802..133524
DNA (723bp) protein (241aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JMG5_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA08875.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
livF-9; branched-chain amino acid ABC transporter ATP-binding protein
qs_4_scaffold_17_127
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

133831..133983
DNA (153bp) protein (51aa)
Universal stress protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CHQ3_9EURY
Universal stress protein {ECO:0000313|EMBL:ELZ21409.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13
qs_4_scaffold_17_128
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(134147..134896)
DNA (750bp) protein (250aa)
Transcription regulator KdgR n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UWF1_HALMA
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AJF24338.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_4_scaffold_17_129
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(135596..137545)
DNA (1950bp) protein (650aa)
Chromosome segregation protein (Spc25, Csm1, Pcs1) n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYR7_9EURY
Chromosome segregation protein (Spc25, Csm1, Pcs1) {ECO:0000313|EMBL:ELZ27009.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
Chromosome segregation protein (Spc25, Csm1, Pcs1)
qs_4_scaffold_17_130
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(137778..138425)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D8G6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ31771.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_4_scaffold_17_131
unknown

Not on your lists

138482..138643
DNA (162bp) protein (54aa)

This feature has no annotations

qs_4_scaffold_17_132
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(138981..139304)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DSK9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK39141.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
qs_4_scaffold_17_133
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

139443..140375
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003775F1C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ68903.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
qs_4_scaffold_17_134
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(140398..140811)
DNA (414bp) protein (138aa)
Uncharacterized protein n=3 Tax=Archaea RepID=B9LVD9_HALLT
hypothetical protein
PadR family transcriptional regulator {ECO:0000313|EMBL:AHG05646.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacteri
qs_4_scaffold_17_135
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(141030..141527)
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Halobacteriaceae RepID=B9LVE2_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58655.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qs_4_scaffold_17_136
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(141520..142200)
DNA (681bp) protein (227aa)
DNA polymerase beta domain protein region n=2 Tax=Halobacteriaceae RepID=B9LVE3_HALLT
DNA polymerase beta domain protein region
DNA polymerase subunit beta {ECO:0000313|EMBL:AHG05613.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1
qs_4_scaffold_17_137
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(142557..143123)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DSL7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK39151.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
qs_4_scaffold_17_138
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(143145..143642)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A4Y0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY93609.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
hypothetical protein
qs_4_scaffold_17_139

Not on your lists

comp(144125..145513)
DNA (1389bp) protein (463aa)
Beta-lactamase n=1 Tax=halophilic archaeon DL31 RepID=G2MN29_9ARCH
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AEN06958.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_4_scaffold_17_140

Not on your lists

comp(145741..145869)
DNA (129bp) protein (43aa)
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily {ECO:0000313|EMBL:ESS03711.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
qs_4_scaffold_17_141

Not on your lists

comp(146041..147636)
DNA (1596bp) protein (532aa)
N-acyl-D-glutamate deacylase (EC:3.5.1.82)
N-acyl-D-glutamate deacylase {ECO:0000313|EMBL:AEN06952.1}; EC=3.5.1.82 {ECO:0000313|EMBL:AEN06952.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
N-acyl-D-glutamate deacylase n=1 Tax=halophilic archaeon DL31 RepID=G2MN23_9ARCH
qs_4_scaffold_17_142
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

148474..150156
DNA (1683bp) protein (561aa)
Extracellular solute-binding protein family 5 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAI3_SPHTD
extracellular solute-binding protein family 5
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACZ40826.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae;
qs_4_scaffold_17_143
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

150149..151111
DNA (963bp) protein (321aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A0T9_NATTJ
Peptide ABC transporter {ECO:0000313|EMBL:KGG80390.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
binding-protein-dependent transport system inner membrane protein
qs_4_scaffold_17_144
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

151111..152022
DNA (912bp) protein (304aa)
Dipeptide transport system permease protein dppC n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P898_FUSNV
Dipeptide transport system permease protein dppC {ECO:0000313|EMBL:EAA25160.1}; TaxID=209882 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium
hypothetical protein
qs_4_scaffold_17_145
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

152022..153029
DNA (1008bp) protein (336aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z7B0_9BACT
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:EFC91357.1}; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Dethiosulfovibrio.;" so
qs_4_scaffold_17_146
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

153026..154018
DNA (993bp) protein (331aa)
Putative dipeptides/oligopeptides ABC transporter ATP-binding protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H874_9EURY
Putative dipeptides/oligopeptides ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ79988.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofer
dppF4; putative dipeptides/oligopeptides ABC transporter ATP-binding protein
qs_4_scaffold_17_147

Not on your lists

154418..155818
DNA (1401bp) protein (467aa)
Beta-lactamase n=1 Tax=halophilic archaeon DL31 RepID=G2MN29_9ARCH
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AEN06958.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_4_scaffold_17_148

Not on your lists

155881..156993
DNA (1113bp) protein (371aa)
Peptidase M19 renal dipeptidase n=1 Tax=halophilic archaeon DL31 RepID=G2MN28_9ARCH
peptidase M19
Peptidase M19 renal dipeptidase {ECO:0000313|EMBL:AEN06957.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_4_scaffold_17_149

Not on your lists

157066..157791
DNA (726bp) protein (242aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MN27_9ARCH
bacterio-opsin activator HTH domain-containing protein
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:AEN06956.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_4_scaffold_17_150

Not on your lists

158143..159675
DNA (1533bp) protein (511aa)
Microcystin LR degradation protein MlrC n=1 Tax=halophilic archaeon DL31 RepID=G2MN21_9ARCH
microcystin LR degradation protein MlrC
Microcystin LR degradation protein MlrC {ECO:0000313|EMBL:AEN06950.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Displaying items 121-150 of 302 in total

View Taxonomy