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qs_4_scaffold_17

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Displaying items 1-30 of 302 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_17_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..2063)
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMC7_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50732.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_4_scaffold_17_2

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comp(2338..3051)
DNA (714bp) protein (238aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein id=24635986 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ESS11174.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC transporter
qs_4_scaffold_17_3

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comp(3048..3866)
DNA (819bp) protein (273aa)
ABC-type branched-chain amino acid transport system, ATPase component n=2 Tax=Archaea RepID=U1NJD6_9EURY
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ESS11175.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC transporter
qs_4_scaffold_17_4

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comp(3863..4747)
DNA (885bp) protein (295aa)
Branched-chain amino acid ABC-type transport system, permease component n=2 Tax=Archaea RepID=U1P0J1_9EURY
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ESS11176.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
qs_4_scaffold_17_5

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4909..6279
DNA (1371bp) protein (457aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR60 RepID=V4YIM2_9ARCH
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ESS11177.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;
extracellular ligand-binding receptor
qs_4_scaffold_17_6

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6286..7566
DNA (1281bp) protein (427aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y8C7_9ARCH
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ESS11178.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
qs_4_scaffold_17_7
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7632..8423
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPU2_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA47656.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
qs_4_scaffold_17_8
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8503..9465
DNA (963bp) protein (321aa)
ATPase AAA n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DNA3_9EURY
ATPase AAA {ECO:0000313|EMBL:ELZ36303.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137.;"
ATPase
qs_4_scaffold_17_9
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9518..10633)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DNK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ36302.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
qs_4_scaffold_17_10
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10630..11970)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DLB8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ36301.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
qs_4_scaffold_17_11
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11967..12581)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DLD4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ36300.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
qs_4_scaffold_17_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12574..15261)
DNA (2688bp) protein (896aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HSB1_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM55937.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
qs_4_scaffold_17_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15458..16624
DNA (1167bp) protein (389aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_01244}; Short=DHQ synthase {ECO:0000255|HAMAP-Rule:MF_01244};; EC=1.4.1.24 {ECO:0000255|HAMAP-Rule:MF_01244};; 3-dehydroquinate synthase II {ECO:00
3-dehydroquinate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DHQS_NATPD
qs_4_scaffold_17_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17136..19271)
DNA (2136bp) protein (712aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:R
katG; catalase-peroxidase (EC:1.11.1.21)
Catalase-peroxidase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWP2_9EURY
qs_4_scaffold_17_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19374..20063)
DNA (690bp) protein (230aa)
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRN2_NATPD
qs_4_scaffold_17_16
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20081..21091)
DNA (1011bp) protein (337aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
zim; CTAG modification methylase (EC:2.1.1.113)
CTAG modification methylase / site-specific DNA-methyltransferase (Cytosine-N4-specific) n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HSL3_9EURY
qs_4_scaffold_17_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21487..23289
DNA (1803bp) protein (601aa)
aglD; glycosyltransferase AglD (EC:2.4.-.-)
Glycosyltransferase AglD {ECO:0000313|EMBL:CCQ35413.1}; EC=2.4.-.- {ECO:0000313|EMBL:CCQ35413.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Glycosyltransferase AglD n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNB3_NATM8
qs_4_scaffold_17_18
unknown

Not on your lists

23652..24149
DNA (498bp) protein (166aa)

This feature has no annotations

qs_4_scaffold_17_19
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(24585..24845)
DNA (261bp) protein (87aa)
Rpo operon protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NWY8_9EURY
Rpo operon protein {ECO:0000313|EMBL:EMA61075.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
rpo operon protein
qs_4_scaffold_17_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(24868..25002)
DNA (135bp) protein (45aa)
rpoP; DNA-directed RNA polymerase subunit P (EC:2.7.7.6)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit P n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPW7_NATM8
qs_4_scaffold_17_21
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25005..25268)
DNA (264bp) protein (88aa)
50S ribosomal protein L37Ae n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBN1_HALXS
ribosomal L37ae protein
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natri
qs_4_scaffold_17_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25393..26115)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKK8_NATM8
hypothetical protein
DUF2103 family protein {ECO:0000313|EMBL:CCQ36078.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
qs_4_scaffold_17_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26169..26723)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMH2_NATPD
rnhA operon protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50686.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_4_scaffold_17_24
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26716..27306)
DNA (591bp) protein (197aa)
Ribonuclease H n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FG00_9EURY
Ribonuclease H {ECO:0000313|EMBL:ELZ37749.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137.;"
rnhA; ribonuclease H I
qs_4_scaffold_17_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27465..28433
DNA (969bp) protein (323aa)
Transcription initiation factor IIB n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMH4_NATPD
tfbA_8; transcription initiation factor TFB 8
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qs_4_scaffold_17_26

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28554..31445
DNA (2892bp) protein (964aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=halophilic archaeon DL31 RepID=G2MMR2_9ARCH
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEN06610.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_4_scaffold_17_27

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31538..34183
DNA (2646bp) protein (882aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=halophilic archaeon DL31 RepID=G2MMR2_9ARCH
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEN06610.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_4_scaffold_17_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

34330..35619
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMH6_NATPD
hypothetical protein
DUF650/DUF651 domain protein {ECO:0000313|EMBL:CAI50682.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qs_4_scaffold_17_29
unknown

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35664..35813
DNA (150bp) protein (50aa)

This feature has no annotations

qs_4_scaffold_17_30

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comp(35832..36458)
DNA (627bp) protein (209aa)
msrA2; peptide methionine sulfoxide reductase MsrA (S-form specific) (EC:1.8.4.11)
msrA; peptide methionine sulfoxide reductase (S-form specific) id=24634212 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Peptide methionine sulfoxide reductase {ECO:0000313|EMBL:ESS07418.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
Displaying items 1-30 of 302 in total

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