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qs_4_scaffold_319

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Displaying items 1-30 of 112 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_319_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(997..1311)
DNA (315bp) protein (105aa)
Nonhistone chromosomal protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMY0_NATM8
nonhistone chromosomal protein
Nonhistone chromosomal protein {ECO:0000313|EMBL:CCQ35240.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
qs_4_scaffold_319_2
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1507..1740
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTI0_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ65925.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
qs_4_scaffold_319_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1808..2860
DNA (1053bp) protein (351aa)
pyrD; dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
Dihydroorotate dehydrogenase (quinone) {ECO:0000255|HAMAP-Rule:MF_00225}; EC=1.3.5.2 {ECO:0000255|HAMAP-Rule:MF_00225};; DHOdehase {ECO:0000255|HAMAP-Rule:MF_00225}; Short=DHOD {ECO:0000255|HAMAP-Rule
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PYRD_NATPD
qs_4_scaffold_319_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2899..4737)
DNA (1839bp) protein (613aa)
pheT; phenylalanine--tRNA ligase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU55_NATM8
qs_4_scaffold_319_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4737..6242)
DNA (1506bp) protein (502aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000313|EMBL:CAI48439.1}; EC=6.1.1.20 {ECO:0000313|EMBL:CAI48439.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITU4_NATPD
qs_4_scaffold_319_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6930..8207)
DNA (1278bp) protein (426aa)
ahcY; adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP65_NATM8
qs_4_scaffold_319_7
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8367..9365)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LPT2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ40165.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
qs_4_scaffold_319_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9496..10794)
DNA (1299bp) protein (433aa)
guaD_1; nucleoside deaminase 1 (cytosine deaminase, guanine deaminase ) (EC:3.5.4.3 3.5.4.1)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000255|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000255|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000255|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=MTAD_NATPD
qs_4_scaffold_319_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10888..11739
DNA (852bp) protein (284aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-R
ATP phosphoribosyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYX5_NATM8
qs_4_scaffold_319_10
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11772..12968)
DNA (1197bp) protein (399aa)
Pyrrolo-quinoline quinone n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AEG3_NATGS
WD40-like repeat protein
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ELY66752.1}; WD40-like repeat protein {ECO:0000313|EMBL:AFZ71450.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae
qs_4_scaffold_319_11
unknown

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13305..14147
DNA (843bp) protein (281aa)

This feature has no annotations

qs_4_scaffold_319_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14536..14886)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4W9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29224.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_319_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14923..15486)
DNA (564bp) protein (188aa)
TATA-box-binding protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TBP_NATPD
tbpE; transcription factor
TATA-box-binding protein {ECO:0000255|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000255|HAMAP-Rule:MF_00408}; Short=BAP {ECO:0000255|HAMAP-Rule:MF_00408};; TATA sequence-binding protein {ECO:00
qs_4_scaffold_319_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15741..16700
DNA (960bp) protein (320aa)
trmG10; tRNA (guanine(10),N(2))-dimethyltransferase (EC:2.1.1.213)
tRNA (Guanine(10),N(2))-dimethyltransferase {ECO:0000313|EMBL:CCQ37625.1}; EC=2.1.1.213 {ECO:0000313|EMBL:CCQ37625.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
tRNA (Guanine(10),N(2))-dimethyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLF5_NATM8
qs_4_scaffold_319_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16758..17132
DNA (375bp) protein (125aa)
imd1; inosine monophosphate dehydrogenase (EC:1.1.1.205)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQD7_9EURY
Signal transduction protein with CBS domain protein {ECO:0000313|EMBL:EJN58071.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum sala
qs_4_scaffold_319_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17133..18131)
DNA (999bp) protein (333aa)
Replication factor C small subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITA9_NATPD
rfcC; replication factor C small subunit 2
Replication factor C small subunit {ECO:0000313|EMBL:CAI48625.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas ph
qs_4_scaffold_319_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18228..19598
DNA (1371bp) protein (457aa)
pmm2; phosphohexomutase (phosphoglucomutase / phosphomannomutase) (EC:5.4.2.-)
Phosphohexomutase (Phosphoglucomutase / phosphomannomutase) {ECO:0000313|EMBL:CCQ37697.1}; EC=5.4.2.- {ECO:0000313|EMBL:CCQ37697.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Haloba
Phosphohexomutase (Phosphoglucomutase / phosphomannomutase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y568_NATM8
qs_4_scaffold_319_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19605..19949)
DNA (345bp) protein (115aa)
GNAT family acetyltransferase {ECO:0000313|EMBL:CAI48543.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAI48543.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
GNAT family acetyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITJ0_NATPD
protein N-acetyltransferase-like protein
qs_4_scaffold_319_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20054..21088)
DNA (1035bp) protein (345aa)
DUF583 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN39_NATM8
DUF583 family protein
DUF583 family protein {ECO:0000313|EMBL:CCQ35294.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
qs_4_scaffold_319_20

Not on your lists

21168..22823
DNA (1656bp) protein (552aa)
DNA polymerase III, delta subunit n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y1V2_9ARCH
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ESS06606.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
replication factor C small subunit
qs_4_scaffold_319_21
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23457..23717
DNA (261bp) protein (87aa)
Translation initiation factor 1A n=3 Tax=Archaea RepID=U1Q9Z9_9EURY
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
tif1A_2; translation initiation factor IF-1A
qs_4_scaffold_319_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(23755..25539)
DNA (1785bp) protein (595aa)
glyS; glycine--tRNA ligase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000313|EMBL:CCQ35583.1}; EC=6.1.1.14 {ECO:0000313|EMBL:CCQ35583.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomo
Glycine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNP4_NATM8
qs_4_scaffold_319_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25536..26387)
DNA (852bp) protein (284aa)
CBS domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNR7_NATM8
cbs2; CBS domain protein
CBS domain protein {ECO:0000313|EMBL:CCQ35582.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
qs_4_scaffold_319_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26441..26809)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU05_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48378.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_4_scaffold_319_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26874..27341)
DNA (468bp) protein (156aa)
Cupin 2 barrel domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU06_NATPD
hypothetical protein
Cupin 2 barrel domain protein {ECO:0000313|EMBL:CAI48377.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qs_4_scaffold_319_26
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27620..29272)
DNA (1653bp) protein (551aa)
Thermosome subunit 2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU07_NATPD
ths_2; thermosome subunit 2 (beta subunit)
Thermosome subunit 2 {ECO:0000313|EMBL:CAI48376.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strai
qs_4_scaffold_319_27
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29682..30491)
DNA (810bp) protein (270aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Halonotius sp. J07HN6 RepID=U1NE98_9EURY
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:ERH01630.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halono
potC2; spermidine/putrescine ABC transporter permease
qs_4_scaffold_319_28
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30488..31360)
DNA (873bp) protein (291aa)
potB2; spermidine/putrescine ABC transporter permease; K02054 putative spermidine/putrescine transport system permease protein id=24617470 bin=Halonotius_J07HN4 species=unknown genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:ERH01631.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonot
potB; ABC-type transport system permease protein (probable substrate spermidine/putrescine)
qs_4_scaffold_319_29
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31347..32480)
DNA (1134bp) protein (378aa)
Spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L0M6_9EURY
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA14401.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" so
potA; ABC-type spermidine/putrescine transport system,ATP-binding protein
qs_4_scaffold_319_30
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32483..33442)
DNA (960bp) protein (320aa)
Spermidine/putrescine ABC transporter spermidine/putrescine binding protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JZ27_9EURY
Spermidine/putrescine ABC transporter spermidine/putrescine binding protein {ECO:0000313|EMBL:EMA14402.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
potD2; spermidine/putrescine ABC transporter spermidine/putrescine binding protein
Displaying items 1-30 of 112 in total

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