ggKbase home page

qs_4_scaffold_593

Search features with annotation key words

Displaying items 1-30 of 87 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_593_1
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..350)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JWZ5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB36644.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qs_4_scaffold_593_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(490..720)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUT8_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48092.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_4_scaffold_593_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(807..1226)
DNA (420bp) protein (140aa)
Hsp20-type molecular chaperone n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQZ7_NATM8
hsp20B; Hsp20-type molecular chaperone
Hsp20-type molecular chaperone {ECO:0000313|EMBL:CCQ36609.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
qs_4_scaffold_593_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1223..1381)
DNA (159bp) protein (53aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y2A1_NATM8
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCQ36610.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
qs_4_scaffold_593_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1450..2262
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR32_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36611.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_4_scaffold_593_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2308..4062
DNA (1755bp) protein (585aa)
Radical SAM domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKW2_NATM8
radical SAM domain protein
Radical SAM domain protein {ECO:0000313|EMBL:CCQ36613.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensi
qs_4_scaffold_593_7
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4124..4411)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NZX0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA62819.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
qs_4_scaffold_593_8
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4463..4930)
DNA (468bp) protein (156aa)
Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD) n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0FV92_9EURY
Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD) {ECO:0000313|EMBL:ELZ63890.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" so
hypothetical protein
qs_4_scaffold_593_9
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4975..6144)
DNA (1170bp) protein (390aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JMP8_9EURY
msmX-3; sugar ABC transporter ATP-binding protein
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA08945.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
qs_4_scaffold_593_10
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6144..7043)
DNA (900bp) protein (300aa)
Glycerol--phosphate ABC transporter permease n=2 Tax=Haloarcula hispanica RepID=G0HZ09_HALHT
sn-glycerol-3-phosphate ABC transporter permease
Glycerol--phosphate ABC transporter permease {ECO:0000313|EMBL:AEM59060.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarc
qs_4_scaffold_593_11
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7050..8018)
DNA (969bp) protein (323aa)
ABC transporter permease n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KIW8_9EURY
ABC transporter permease protein {ECO:0000313|EMBL:AAV48477.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismor
ugpA; ABC transporter permease
qs_4_scaffold_593_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8019..9335)
DNA (1317bp) protein (439aa)
Glycerol-3-phosphate ABC transporter periplasmic substrate-binding protein n=3 Tax=Haloarcula RepID=G0HZ07_HALHT
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHB67753.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
qs_4_scaffold_593_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9510..10109)
DNA (600bp) protein (200aa)
Mut/nudix family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5J4_9EURY
Mut/nudix family protein {ECO:0000313|EMBL:EMA53192.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
nudix family protein
qs_4_scaffold_593_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10134..10586)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISZ4_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48741.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_4_scaffold_593_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10668..11735
DNA (1068bp) protein (356aa)
Probable glycosyltransferase, type 1 {ECO:0000313|EMBL:CAI48829.1}; EC=2.4.-.- {ECO:0000313|EMBL:CAI48829.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
Probable glycosyltransferase, type 1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISQ6_NATPD
hexosyltransferase homolog 3
qs_4_scaffold_593_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11995..13980
DNA (1986bp) protein (662aa)
fadD2; long-chain fatty-acid-CoA ligase (EC:6.2.1.3)
Long-chain fatty-acid-CoA ligase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JFF1_HALVA
Long-chain fatty-acid-CoA ligase {ECO:0000313|EMBL:EMA07847.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismo
qs_4_scaffold_593_17
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14507..14875
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJH4_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA07850.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_4_scaffold_593_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14917..15756)
DNA (840bp) protein (280aa)
HtpX-like protease {ECO:0000313|EMBL:CAI48833.1}; EC=3.4.24.- {ECO:0000313|EMBL:CAI48833.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomona
HtpX-like protease n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISQ2_NATPD
htpX_2; htpX protein
qs_4_scaffold_593_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16039..16926
DNA (888bp) protein (296aa)
dapA; 4-hydroxy-tetrahydrodipicolinate synthase (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=268739 species
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS38_NATM8
qs_4_scaffold_593_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16923..17669
DNA (747bp) protein (249aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000255|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000255|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000255|HAMAP-Rule:MF_00102};; TaxID=348780 spec
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DAPB_NATPD
qs_4_scaffold_593_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17713..18549
DNA (837bp) protein (279aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:CAI48838.1}; EC=2.3.1.117 {ECO:0000313|EMBL:CAI48838.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteri
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISP8_NATPD
qs_4_scaffold_593_22
Paenisporosarcina sp. HGH0030, Paenisporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18560..18877)
DNA (318bp) protein (106aa)
Thioredoxin n=2 Tax=Erwinia amylovora RepID=N0G7T5_ERWAM
trxA; Thioredoxin 1
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1078085 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Paenisporosarcina.;" source="Paenisporosarcina sp. HGH0030.;"
qs_4_scaffold_593_23
unknown

Not on your lists

comp(18877..18969)
DNA (93bp) protein (31aa)

This feature has no annotations

qs_4_scaffold_593_24
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19108..19536
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2Z8Z9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57110.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_4_scaffold_593_25
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19546..19929)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EVZ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ51248.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
qs_4_scaffold_593_26
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20429..21673
DNA (1245bp) protein (415aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISH2_NATPD
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
qs_4_scaffold_593_27
unknown

Not on your lists

comp(22254..22787)
DNA (534bp) protein (178aa)

This feature has no annotations

qs_4_scaffold_593_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23205..24533
DNA (1329bp) protein (443aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVW1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91374.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_4_scaffold_593_29
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24798..25280)
DNA (483bp) protein (161aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AFL3_NATGS
adenylosuccinate lyase
qs_4_scaffold_593_30
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25229..26062)
DNA (834bp) protein (278aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000313|EMBL:CCQ37139.1}; EC=4.3.2.2 {ECO:0000313|EMBL:CCQ37139.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronom
Adenylosuccinate lyase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL60_NATM8
Displaying items 1-30 of 87 in total

View Taxonomy