ggKbase home page

qs_4_scaffold_1382

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1382_1
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..209)
DNA (207bp) protein (69aa)
Transcription initiation factor IIB n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WUB0_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
Transcription factor TFIIB cyclin-related protein
qs_4_scaffold_1382_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(531..839)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZR3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50329.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_4_scaffold_1382_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(922..1197)
DNA (276bp) protein (92aa)
Transcriptional regulator, arsr family protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MCK9_HALMO
Transcriptional regulator, arsr family protein {ECO:0000313|EMBL:EMA42135.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
ArsR family transcriptional regulator
qs_4_scaffold_1382_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1304..1588)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4P8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39584.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_4_scaffold_1382_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1753..2823
DNA (1071bp) protein (357aa)
Thioredoxin reductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKY3_9EURY
Thioredoxin reductase {ECO:0000313|EMBL:EMA45399.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DS
thioredoxin reductase
qs_4_scaffold_1382_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2941..4707
DNA (1767bp) protein (589aa)
Asparagine synthase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2W6_9EURY
Asparagine synthase {ECO:0000313|EMBL:EMA40157.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
asparagine synthase
qs_4_scaffold_1382_7
unknown

Not on your lists

5049..5162
DNA (114bp) protein (38aa)

This feature has no annotations

qs_4_scaffold_1382_8
unknown

Not on your lists

comp(5284..5568)
DNA (285bp) protein (95aa)

This feature has no annotations

qs_4_scaffold_1382_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5719..6108
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50842.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_1382_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6210..6659
DNA (450bp) protein (150aa)
UPF0179 protein C451_13044 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N222_9EURY
UPF0179 protein C451_13044 {ECO:0000256|HAMAP-Rule:MF_00498}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
hypothetical protein
qs_4_scaffold_1382_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6715..7821)
DNA (1107bp) protein (369aa)
Succinylglutamate desuccinylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM27_9EURY
Succinylglutamate desuccinylase {ECO:0000313|EMBL:EMA45789.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
succinylglutamate desuccinylase/aspartoacylase
qs_4_scaffold_1382_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8182..8664)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4H8V7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87150.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_4_scaffold_1382_trna_1
unknown

Not on your lists

8830..8914
DNA (85bp)
transferRNA
qs_4_scaffold_1382_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9286..9642
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QNS8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH08728.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_4_scaffold_1382_14
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9591..9812)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9Q9_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA05244.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
qs_4_scaffold_1382_15
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9969..10580)
DNA (612bp) protein (204aa)
Sodium symporter protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y8L1_9EURY
Sodium symporter protein {ECO:0000313|EMBL:ELY70002.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
putative sodium:solute symporter, VC_2705 subfamily
Displaying 16 items

View Taxonomy