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qs_4_scaffold_182

Search features with annotation key words

Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_182_trna_1
unknown

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817..892
DNA (76bp)
transferRNA
qs_4_scaffold_182_1
Fusarium oxysporum, Fusarium, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

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922..1920
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00037AF063
Mucin-1 {ECO:0000313|EMBL:EMT72901.1}; TaxID=1229665 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium ox
Hep_Hag family protein
qs_4_scaffold_182_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2217..2501
DNA (285bp) protein (95aa)
rpl44e; 50S ribosomal protein L44e; K02929 large subunit ribosomal protein L44e id=24646602 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rpl44e; 50S ribosomal protein L44e
qs_4_scaffold_182_3
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2501..2716
DNA (216bp) protein (72aa)
30S ribosomal protein S27e n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NR37_HALUD
rps27e; 30S ribosomal protein S27e
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000256|RuleBase:RU000671}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.
qs_4_scaffold_182_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2713..3513
DNA (801bp) protein (267aa)
Translation initiation factor IF-2 subunit alpha n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1U6_9EURY
Translation initiation factor IF-2 subunit alpha {ECO:0000313|EMBL:EMA51079.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
translation initiation factor 2 subunit alpha
qs_4_scaffold_182_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3793..4545
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M781_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA40464.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
3-isopropylmalate dehydratase
qs_4_scaffold_182_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4780..6258
DNA (1479bp) protein (493aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1227456 species="Archaea; Euryarchaeota; Halo
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWG6_9EURY
qs_4_scaffold_182_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6288..6848
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50063.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_182_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6936..7346)
DNA (411bp) protein (137aa)
CBS domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INP6_NATPD
cbs_6; CBS domain-containing protein
CBS domain protein {ECO:0000313|EMBL:CAI50256.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_4_scaffold_182_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7559..8941
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JF85_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59034.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
pyrrolo-quinoline quinone
qs_4_scaffold_182_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9014..10105
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1I8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50530.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
penicillin binding protein
qs_4_scaffold_182_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10210..10494
DNA (285bp) protein (95aa)
NADH dehydrogenase subunit J {ECO:0000313|EMBL:EMA45897.1}; EC=1.6.5.3 {ECO:0000313|EMBL:EMA45897.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
nuoJ1; NADH dehydrogenase-like complex subunit J1 (EC:1.6.5.-)
NADH dehydrogenase subunit J n=2 Tax=Halococcus RepID=M0N1B2_9EURY
qs_4_scaffold_182_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10491..10874
DNA (384bp) protein (128aa)
NADH dehydrogenase-like complex subunit J2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2G2_9EURY
NADH dehydrogenase-like complex subunit J2 {ECO:0000313|EMBL:EMA50895.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
NADH dehydrogenase-like complex, subunit J2
qs_4_scaffold_182_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10875..11177
DNA (303bp) protein (101aa)
NADH dehydrogenase subunit K (Ubiquinone) n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMC9_9EURY
NADH dehydrogenase subunit K (Ubiquinone) {ECO:0000313|EMBL:EMA45899.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
NADH-quinone oxidoreductase subunit K
qs_4_scaffold_182_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11179..13203
DNA (2025bp) protein (675aa)
NADH dehydrogenase subunit l (EC:1.6.5.3)
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M914_HALMO
Proton-translocating NADH-quinone oxidoreductase, chain L {ECO:0000313|EMBL:EMA42282.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" so
qs_4_scaffold_182_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13205..14725
DNA (1521bp) protein (507aa)
Proton-translocating NADH-quinone oxidoreductase subunit M n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJQ7_9EURY
Proton-translocating NADH-quinone oxidoreductase subunit M {ECO:0000313|EMBL:EMA45901.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
nuoM; NADH dehydrogenase-like complex, subunit M
qs_4_scaffold_182_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14725..16197
DNA (1473bp) protein (491aa)
NADH dehydrogenase-like complex subunit N n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1B7_9EURY
NADH dehydrogenase-like complex subunit N {ECO:0000313|EMBL:EMA50899.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
proton-translocating NADH-quinone oxidoreductase, chain N
qs_4_scaffold_182_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16591..18069
DNA (1479bp) protein (493aa)
Phosphoesterase RecJ domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWV6_9EURY
Phosphoesterase RecJ domain-containing protein {ECO:0000313|EMBL:EMA49319.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
phosphoesterase RecJ domain-containing protein
qs_4_scaffold_182_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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18232..19035
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFN6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44188.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
putative signal transduction protein with CBS domains
qs_4_scaffold_182_19
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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19078..20874
DNA (1797bp) protein (599aa)
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M420_HALMO
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:EMA39374.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus m
qs_4_scaffold_182_20
Paenibacillus sp. FSL H7-0737, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20946..23126
DNA (2181bp) protein (727aa)
Uncharacterized protein {ECO:0000313|EMBL:AIQ22553.1}; TaxID=1536775 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0737.;"
sna:Snas_4283 metallophosphoesterase id=1246277 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Rhs element Vgr family protein
qs_4_scaffold_182_21
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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23126..23947
DNA (822bp) protein (274aa)
Halocyanin-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5X4_9EURY
Halocyanin-like protein {ECO:0000313|EMBL:EMA39999.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hcp4; halocyanin precursor-like
qs_4_scaffold_182_22
unknown

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comp(23891..24766)
DNA (876bp) protein (292aa)

This feature has no annotations

qs_4_scaffold_182_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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25229..27214
DNA (1986bp) protein (662aa)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZL1_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA51172.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
AMP-dependent synthetase and ligase
qs_4_scaffold_182_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27372..28193)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJE6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45478.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_182_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28190..28855)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML73_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45479.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_182_26
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28855..29403)
DNA (549bp) protein (183aa)
Transcription factor E n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3B3_9EURY
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
transcription factor E
qs_4_scaffold_182_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29443..30201)
DNA (759bp) protein (253aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6G2_9EURY
tRNA cytosine methylase Pos56
qs_4_scaffold_182_28
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30236..30976)
DNA (741bp) protein (247aa)
DSBA oxidoreductase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPQ4_HALMO
DSBA oxidoreductase {ECO:0000313|EMBL:EMA47687.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
DSBA oxidoreductase
qs_4_scaffold_182_29
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31188..32117
DNA (930bp) protein (310aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CCQ32382.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CCQ32382.1};; UDP-glucose 4-epimerase protein {ECO:0000313|EMBL:ERJ06915.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ERJ06915.1
UDP-glucose 4-epimerase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PHS0_9EURY
Displaying items 1-30 of 49 in total

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