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qs_4_scaffold_567

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_567_1
unknown

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comp(1..114)
DNA (114bp) protein (38aa)

This feature has no annotations

qs_4_scaffold_567_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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247..1842
DNA (1596bp) protein (532aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=1227457 species="Archaea; Eurya
DNA polymerase II small subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4N0_9EURY
DNA polymerase II
qs_4_scaffold_567_3

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2037..2420
DNA (384bp) protein (128aa)
Marine sediment metagenome DNA, contig: S12H4_C03518 {ECO:0000313|EMBL:GAI67997.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
qs_4_scaffold_567_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2748..2966)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MF17_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44316.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_4_scaffold_567_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2959..3342)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIN5_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44315.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_4_scaffold_567_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3438..3818)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEK1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55110.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_567_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4322..5500
DNA (1179bp) protein (393aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
lysC; aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME43_9EURY
qs_4_scaffold_567_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5685..6344)
DNA (660bp) protein (220aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus
Serine/threonine protein phosphatase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAX2_9EURY
phosphodiesterase
qs_4_scaffold_567_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6396..7025)
DNA (630bp) protein (210aa)
IMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00705}; EC=3.5.4.10 {ECO:0000256|HAMAP-Rule:MF_00705};; IMP synthase {ECO:0000256|HAMAP-Rule:MF_00705}; Inosinicase {ECO:0000256|HAMAP-Rule:MF_00705}; Tax
IMP cyclohydrolase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2FEX0_9EURY
IMP cyclohydrolase
qs_4_scaffold_567_trna_1
unknown

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7472..7544
DNA (73bp)
transferRNA
qs_4_scaffold_567_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8139..8711)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVL6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49792.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_567_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8735..10642
DNA (1908bp) protein (636aa)
ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D2X6_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ29881.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
ABC-type transport system ATP-binding/permease protein
qs_4_scaffold_567_12
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10814..11230)
DNA (417bp) protein (139aa)
restriction endonuclease-like protein; K07454 putative restriction endonuclease id=24616331 bin=Halobonum_tyrrellensis species=Halorubrum lipolyticum genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Restriction endonuclease-like protein {ECO:0000313|EMBL:EMA60401.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocuri
hypothetical protein
qs_4_scaffold_567_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11377..14211)
DNA (2835bp) protein (945aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=3 Tax=Halococcus hamelinensis RepID=M0M6D9_9EURY
alanyl-tRNA synthetase
qs_4_scaffold_567_14
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14394..17504)
DNA (3111bp) protein (1037aa)
Replication factor C small subunit n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CAD8_9EURY
Replication factor C small subunit {ECO:0000313|EMBL:ELZ19317.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limic
replication factor C
qs_4_scaffold_567_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17633..17833
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH46_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43760.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_567_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17993..18481)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MA05_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42178.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_4_scaffold_567_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18565..19140)
DNA (576bp) protein (192aa)
Membrane-flanked domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M352_9EURY
Membrane-flanked domain-containing protein {ECO:0000313|EMBL:EMA38825.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
membrane-flanked domain-containing protein
qs_4_scaffold_567_18
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19374..19658
DNA (285bp) protein (95aa)
Translation initiation factor 1A n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EQP6_9EURY
tif1A2; translation initiation factor aIF-1A
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofera
qs_4_scaffold_567_19
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20156..20875
DNA (720bp) protein (240aa)
Glycosyl transferase family 2 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7U6_HALXS
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEH36677.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain
qs_4_scaffold_567_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(20994..22196)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMC7_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50732.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
Displaying 21 items

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