ggKbase home page

qs_4_scaffold_489

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_489_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..362
DNA (360bp) protein (120aa)
TrkA-N domain protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HP62_9EURY
TrkA-N domain protein {ECO:0000313|EMBL:ESP89714.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonu
TrkA-N domain protein
qs_4_scaffold_489_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

365..1498
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HIU2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP89713.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_4_scaffold_489_3
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1707..3260
DNA (1554bp) protein (518aa)
Trk system potassium uptake protein TrkH n=2 Tax=Haloarcula hispanica RepID=G0I025_HALHT
trkH3; trk system potassium uptake protein TrkH
Potassium transporter Trk {ECO:0000313|EMBL:AHB68110.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601
qs_4_scaffold_489_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3538..4584)
DNA (1047bp) protein (349aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Halomicrobium katesii RepID=UPI000369BEC1
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
qs_4_scaffold_489_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4679..5881
DNA (1203bp) protein (401aa)
Anion permease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZY5_9EURY
Anion permease {ECO:0000313|EMBL:ELZ28811.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
phosphate transporter
qs_4_scaffold_489_6
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6178..6567
DNA (390bp) protein (130aa)
Ferredoxin n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LWM2_9EURY
ferredoxin
Ferredoxin {ECO:0000313|EMBL:EMA37871.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 10879.;"
qs_4_scaffold_489_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7244..8278
DNA (1035bp) protein (345aa)
Peptidase A24B, FlaK domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3S5_9EURY
Peptidase A24B, FlaK domain protein {ECO:0000313|EMBL:ELZ28814.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
peptidase
qs_4_scaffold_489_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8333..8599)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D023_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28815.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_4_scaffold_489_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8747..9364
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYX6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27627.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_489_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9407..10009)
DNA (603bp) protein (201aa)
Phosphoglycerate mutase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3B3_9EURY
Phosphoglycerate mutase {ECO:0000313|EMBL:ELZ29182.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
phosphoglycerate mutase
qs_4_scaffold_489_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10006..11916)
DNA (1911bp) protein (637aa)
Sec-independent periplasmic protein translocase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2V9_9EURY
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source
tatC; twin-arginine translocation protein TatC rbh
qs_4_scaffold_489_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12075..14249
DNA (2175bp) protein (725aa)
Sec-independent periplasmic protein translocase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4T6_9EURY
Sec-independent periplasmic protein translocase {ECO:0000313|EMBL:ELZ29184.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
tatC; twin-arginine translocation protein TatC
qs_4_scaffold_489_13
unknown

Not on your lists

14983..15174
DNA (192bp) protein (64aa)

This feature has no annotations

qs_4_scaffold_489_14
unknown

Not on your lists

15171..15455
DNA (285bp) protein (95aa)

This feature has no annotations

qs_4_scaffold_489_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15516..17006
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P088_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48880.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_489_16
unknown

Not on your lists

comp(16991..17617)
DNA (627bp) protein (209aa)

This feature has no annotations

qs_4_scaffold_489_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17653..17832
DNA (180bp) protein (60aa)
Transcription regulator n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HHW9_9EURY
Transcription regulator {ECO:0000313|EMBL:ESP87504.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
CopG family protein
qs_4_scaffold_489_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17825..18532
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2W3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29188.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_489_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18535..18924)
DNA (390bp) protein (130aa)
Putative heat shock protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWU0_9EURY
Putative heat shock protein {ECO:0000313|EMBL:ELZ27701.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadens
heat shock protein Hsp20
qs_4_scaffold_489_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19233..20243
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D473_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29638.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_489_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20472..21074
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D195_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29286.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_489_22
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21178..21549)
DNA (372bp) protein (124aa)
Heat shock protein Hsp20 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPH3_HALUD
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ACV12728.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (str
qs_4_scaffold_489_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21607..22359
DNA (753bp) protein (251aa)
Beta-lactamase domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZW2_9EURY
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:ELZ28786.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
beta-lactamase domain protein
qs_4_scaffold_489_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22447..23337)
DNA (891bp) protein (297aa)
Alpha/beta hydrolase fold protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D016_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ELZ27479.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carls
alpha/beta hydrolase fold protein
qs_4_scaffold_489_25
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23536..24891
DNA (1356bp) protein (452aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PK39_9EURY
qs_4_scaffold_489_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24908..25465)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMM5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23652.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_489_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25521..25955)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27477.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_489_28
unknown

Not on your lists

comp(26060..26194)
DNA (135bp) protein (45aa)

This feature has no annotations

qs_4_scaffold_489_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26287..26988
DNA (702bp) protein (234aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {E
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0G1_9EURY
qs_4_scaffold_489_30
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27154..28407
DNA (1254bp) protein (418aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY52_9EURY
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ELZ28161.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
MiaB-like tRNA modifying enzyme
Displaying items 1-30 of 31 in total

View Taxonomy